Evidence map›Paper›PMID 21240271›Full record

ArticleNature structural & molecular biology2011

Structural basis of substrate discrimination and integrin binding by autotaxin.

Jens Hausmann, Satwik Kamtekar, Evangelos Christodoulou, Jacqueline E Day, Tao Wu, Zachary Fulkerson, Harald M H G Albers, Laurens A van Meeteren, Anna J S Houben, Leonie van Zeijl and 14 more

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 129 papers.

0numbers the graph read from it
0cells of the map it votes in
129citing papers in PubMed
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

129 citing papers in PubMed, 279 citations in OpenAlex.

  1. Trial
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  14. Autotaxin inhibitor IOA-289 reduces gastrointestinal cancer progression in preclinical models.Journal of experimental & clinical cancer research : CR · 2023
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Lysophosphatidic acid signaling via LPAJournal of neurochemistry · 2022
    Article
  20. Review

69 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 6 institutions in 4 countries.

Jens HausmannDivision of Biochemistry, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
Satwik Kamtekar
Evangelos Christodoulou
Jacqueline E Day
Tao Wu
Zachary Fulkerson
Harald M H G Albers
Laurens A van Meeteren
Anna J S Houben
Leonie van Zeijl
Silvia Jansen
Maria Andries
Troii Hall
Lyle E Pegg
Timothy E Benson
Mobien Kasiem
Karl Harlos
Craig W Vander Kooi
Susan S Smyth
Huib Ovaa
Mathieu Bollen
Andrew J Morris
Wouter H Moolenaar
Anastassis Perrakis
The Netherlands Cancer Institute · NLPfizer (United States) · USKU Leuven · BELexington VA Health Care System · USUniversity of Kentucky · USCentre for Human Genetics · GB

Funding

THROMBOSPONDIN1 MEDIATES MACROPHAGE INFILTRATION INTO ADIPOSE TISSUE AND PROMOTEP20RR021954 · NCRR · UNIVERSITY OF KENTUCKY · PI ZHOU, CHANGCHENG · 2008 to 2011
$8.3M
Role of Lipid Phosphatases in Cholesterol and Triglyceride SynthesisR01GM050388 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI MORRIS, ANDREW J · 1994 to 2011
$2.7M
Lysolipid Signaling in Cardovascular DiseaseR01HL078663 · NHLBI · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI SMYTH, SUSAN S. · 2004 to 2013
$2.5M
Mechanism of Neuropilin Dependent AngiogenesisR01GM094155 · NIGMS · UNIVERSITY OF KENTUCKY · PI VANDER KOOI, CRAIG · 2010 to 2014
$1.3M
Thermo/Finnigan TSQ AM Triple Stage Quadrupole Mass SpectrometerS10RR024598 · NCRR · UNIVERSITY OF KENTUCKY · PI MORRIS, ANDREW J · 2008 to 2008
$493k
Regulation of Lysolipid Signaling by Autotaxin-Integrin Interactions on PlateletsF30HL099272 · NHLBI · UNIVERSITY OF KENTUCKY · PI FULKERSON, ZACHARY · 2010 to 2013
$102k
NCRR NIH HHS P20 RR021954NCRR NIH HHS P20RR021954NCRR NIH HHS S10 RR024598NHLBI NIH HHS 5T32HL0727-43-06NHLBI NIH HHS F30 HL099272NHLBI NIH HHS HL078663NHLBI NIH HHS R01 HL078663NIGMS NIH HHS GM094155NIGMS NIH HHS GM50388NIGMS NIH HHS R01 GM050388NIGMS NIH HHS R01 GM094155
6 · The paper itself

Abstract

Autotaxin (ATX, also known as ectonucleotide pyrophosphatase/phosphodiesterase-2, ENPP2) is a secreted lysophospholipase D that generates the lipid mediator lysophosphatidic acid (LPA), a mitogen and chemoattractant for many cell types. ATX-LPA signaling is involved in various pathologies including tumor progression and inflammation. However, the molecular basis of substrate recognition and catalysis by ATX and the mechanism by which it interacts with target cells are unclear. Here, we present the crystal structure of ATX, alone and in complex with a small-molecule inhibitor. We have identified a hydrophobic lipid-binding pocket and mapped key residues for catalysis and selection between nucleotide and phospholipid substrates. We have shown that ATX interacts with cell-surface integrins through its N-terminal somatomedin B-like domains, using an atypical mechanism. Our results define determinants of substrate discrimination by the ENPP family, suggest how ATX promotes localized LPA signaling and suggest new approaches for targeting ATX with small-molecule therapeutic agents.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCatalytic DomainCell LineCrystallography, X-RayHumansIntegrinsLysophospholipase DLysophospholipidsMolecular Sequence DataMutationPhosphoric Diester HydrolasesProtein BindingProtein Structure, TertiaryPyrophosphatasesIntegrinslysophosphatidic acidLysophospholipase DLysophospholipidsPhosphoric Diester HydrolasesPyrophosphatases

Identifiers

PMID21240271
PMCPMC3064516
OpenAlexW2096597075

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.