Evidence map›Paper›PMID 21233333›Full record

ArticlePlant physiology2011

The folylpolyglutamate synthetase plastidial isoform is required for postembryonic root development in Arabidopsis.

Avinash C Srivastava, Perla A Ramos-Parra, Mohamed Bedair, Ana L Robledo-Hernández, Yuhong Tang, Lloyd W Sumner, Rocío I Díaz de la Garza, Elison B Blancaflor

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 66 citations in OpenAlex.

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  11. Elimination of human folypolyglutamate synthetase alters programming and plasticity of somatic cells.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
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  13. Combining loss of function ofBiotechnology for biofuels · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Avinash C SrivastavaPlant Biology Division, Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401, USA.
Perla A Ramos-Parra
Mohamed Bedair
Ana L Robledo-Hernández
Yuhong Tang
Lloyd W Sumner
Rocío I Díaz de la Garza
Elison B Blancaflor
Noble Research Institute · USUnited States Department of Energy · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A recessive Arabidopsis (Arabidopsis thaliana) mutant with short primary roots and root hairs was identified from a forward genetic screen. The disrupted gene in the mutant encoded the plastidial isoform of folylpolyglutamate synthetase (FPGS), previously designated as AtDFB, an enzyme that catalyzes the addition of glutamate residues to the folate molecule to form folylpolyglutamates. The short primary root of atdfb was associated with a disorganized quiescent center, dissipated auxin gradient in the root cap, bundled actin cytoskeleton, and reduced cell division and expansion. The accumulation of monoglutamylated forms of some folate classes in atdfb was consistent with impaired FPGS function. The observed cellular defects in roots of atdfb underscore the essential role of folylpolyglutamates in the highly compartmentalized one-carbon transfer reactions (C1 metabolism) that lead to the biosynthesis of compounds required for metabolically active cells found in the growing root apex. Indeed, metabolic profiling uncovered a depletion of several amino acids and nucleotides in atdfb indicative of broad alterations in metabolism. Methionine and purines, which are synthesized de novo in plastids via C1 enzymatic reactions, were particularly depleted. The root growth and quiescent center defects of atdfb were rescued by exogenous application of 5-formyl-tetrahydrofolate, a stable folate that was readily converted to metabolically active folates. Collectively, our results indicate that AtDFB is the predominant FPGS isoform that generates polyglutamylated folate cofactors to support C1 metabolism required for meristem maintenance and cell expansion during postembryonic root development in Arabidopsis.

Indexed as

ArabidopsisArabidopsis ProteinsCarbonCell DivisionCell ProliferationGenome, PlantGlutamic AcidGuanosineIndoleacetic AcidsIsoenzymesMetabolomeMethionineMutationPeptide SynthasesPhenotypePlant Roots5,6,7,8-tetrahydrofolic acidArabidopsis ProteinsCarbonfolylpolyglutamate synthetaseGlutamic AcidGuanosineIndoleacetic AcidsIsoenzymesMethioninePeptide SynthasesTetrahydrofolates

Identifiers

PMID21233333
PMCPMC3046582
OpenAlexW2072264240

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.