Evidence map›Paper›PMID 2123291›Full record

ArticleMolecular and cellular biology1990

Activation of octamer-containing promoters by either octamer-binding transcription factor 1 (OTF-1) or OTF-2 and requirement of an additional B-cell-specific component for optimal transcription of immunoglobulin promoters.

A Pierani, A Heguy, H Fujii, R G Roeder

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1990. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02557711 (The Correlation Between Clinical Examination and Ultrasound Elastography Acoustic Radiation Force Impulse Findings in Hemiplegic Patients With Elbow Flexor Spasticity After Stroke), which is not on this map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02557711 unknown statusnot on this mapstarted 2016, after this paper: background citation

The Correlation Between Clinical Examination and Ultrasound Elastography Acoustic Radiation Force Impulse Findings in Hemiplegic Patients With Elbow Flexor Spasticity After Stroke

TypeobservationalSponsorChang Gung Memorial HospitalRan2016 to 2017Enrolled50ConditionsCerebrovascular AccidentArmsultrasound elastography, acoustic radiation force impulse
3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 113 citations in OpenAlex.

  1. Article
  2. Combinatorial control of gene expression.BioMed research international · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

A PieraniLaboratory of Biochemistry and Molecular Biology, Rockefeller University, New York, New York 10021.
A Heguy
H Fujii
R G Roeder
Rockefeller University · US

Funding

MOLECULAR BASIS OF CELL GROWTH AND TRANSFORMATIONR35CA042567 · NCI · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 1986 to 1999
–
DISCOVERY OF DRUGS INHIBITING HIV REGULATORY GENESU01AI027397 · NIAID · HOFFMANN-LA ROCHE, INC. · PI HSU, MING-CHU · 1988 to 1993
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NCI NIH HHS CA42567NCRR NIH HHS RR05869NIAID NIH HHS AI27397
6 · The paper itself

Abstract

Several distinct octamer-binding transcription factors (OTFs) interact with the sequence ATTTGCAT (the octamer motif), which acts as a transcription regulatory element for a variety of differentially controlled genes. The ubiquitous OTF-1 plays a role in expression of the cell cycle-regulated histone H2b gene as well as several other genes, while the tissue-specific OTF-2 has been implicated in the tissue-specific expression of immunoglobulin genes. In an attempt to understand the apparent transcriptional selectivity of these factors, we have investigated the physical and functional characteristics of OTF-1 purified from HeLa cells and both OTF-1 and OTF-2 purified from B cells. High-resolution footprinting and mobility shift-competition assays indicated that these factors were virtually indistinguishable in binding affinities and DNA-protein contacts on either the H2b or an immunoglobulin light-chain (kappa) promoter. In addition, each of the purified factors showed an equivalent intrinsic capacity to activate transcription from either immunoglobulin promoters (kappa and heavy chain) or the H2b promoter in OTF-depleted HeLa and B-cell extracts. However, with OTF-depleted HeLa extracts, neither factor could restore immunoglobulin gene transcription to the relatively high level observed in unfractionated B-cell extracts. Restoration of full immunoglobulin gene activity appears to require an additional B-cell regulatory component which interacts with the OTFs. The additional B-cell factor could act either by facilitating interaction of OTF activation domains with components of the general transcriptional machinery or by contributing a novel activation domain.

Indexed as

Gene Expression RegulationGenes, ImmunoglobulinPromoter Regions, GeneticTranscription, GeneticBase SequenceCloning, MolecularDeoxyribonuclease IDNA-Binding ProteinsHeLa CellsHistonesHost Cell Factor C1HumansImmunoglobulin Light ChainsKineticsMolecular Sequence DataNucleotide MappingDeoxyribonuclease IDNA-Binding ProteinsHCFC1 protein, humanHistonesHost Cell Factor C1Immunoglobulin Light ChainsOctamer Transcription Factor-1Octamer Transcription Factor-2Oligonucleotide ProbesPOU2F1 protein, humanPOU2F2 protein, humanTranscription Factors

Identifiers

PMID2123291
PMCPMC362895
OpenAlexW2122709844

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.