ArticleFrontiers in neuroinformatics2010
Neuroscience Data Integration through Mediation: An (F)BIRN Case Study.
Article in Frontiers in neuroinformatics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
20 citing papers in PubMed.
- Multitable Methods for Microbiome Data Integration.Frontiers in genetics · 2019Review
- The TRANSFoRm project: Experience and lessons learned regarding functional and interoperability requirements to support primary care.Learning health systems · 2018Article
- Extending XNAT Platform with an Incremental Semantic Framework.Frontiers in neuroinformatics · 2017Article
- SchizConnect: Mediating neuroimaging databases on schizophrenia and related disorders for large-scale integration.NeuroImage · 2016Article
- SchizConnect: Virtual Data Integration in Neuroimaging.Data integration in the life sciences : ... International Workshop, DILS ... : proceedings. DILS (Conference) · 2015Article
- GEM: The GAAIN Entity Mapper.Data integration in the life sciences : ... International Workshop, DILS ... : proceedings. DILS (Conference) · 2015Article
- Medical data transformation using rewriting.Frontiers in neuroinformatics · 2015Article
- The GAAIN Entity Mapper: An Active-Learning System for Medical Data Mapping.Frontiers in neuroinformatics · 2015Article
- Brede tools and federating online neuroinformatics databases.Neuroinformatics · 2014Article
- The rise of large-scale imaging studies in psychiatry.GigaScience · 2014Review
- Towards structured sharing of raw and derived neuroimaging data across existing resources.NeuroImage · 2013Article
- Article
- Biological databases for behavioral neurobiology.International review of neurobiology · 2012Review
- Data sharing in neuroimaging research.Frontiers in neuroinformatics · 2012Article
- A system architecture for sharing de-identified, research-ready brain scans and health information across clinical imaging centers.Studies in health technology and informatics · 2012Article
- Electronic data capture, representation, and applications for neuroimaging.Frontiers in neuroinformatics · 2012Article
- A flexible, open, decentralized system for digital pathology networks.Studies in health technology and informatics · 2012Article
- NeuroLOG: sharing neuroimaging data using an ontology-based federated approach.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2011Article
- Global Data Sharing in Alzheimer Disease Research.Alzheimer disease and associated disordersArticle
- A unified structural/terminological interoperability framework based on LexEVS: application to TRANSFoRm.Journal of the American Medical Informatics Association : JAMIAArticle
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
Abstract
We describe an application of the BIRN mediator to the integration of neuroscience experimental data sources. The BIRN mediator is a general purpose solution to the problem of providing integrated, semantically-consistent access to biomedical data from multiple, distributed, heterogeneous data sources. The system follows the mediation approach, where the data remains at the sources, providers maintain control of the data, and the integration system retrieves data from the sources in real-time in response to client queries. Our aim with this paper is to illustrate how domain-specific data integration applications can be developed quickly and in a principled way by using our general mediation technology. We describe in detail the integration of two leading, but radically different, experimental neuroscience sources, namely, the human imaging database, a relational database, and the eXtensible neuroimaging archive toolkit, an XML web services system. We discuss the steps, sources of complexity, effort, and time required to build such applications, as well as outline directions of ongoing and future research on biomedical data integration.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.