Evidence map›Paper›PMID 21228126›Full record

ArticleThe Journal of general virology2011

Antigenic modules in the N-terminal S1 region of the transmissible gastroenteritis virus spike protein.

Juan Reguera, Desiderio Ordoño, César Santiago, Luis Enjuanes, José M Casasnovas

Open access · hybridAbstract read
In one paragraph

Article in The Journal of general virology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.3field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Juan RegueraDepartment of Macromolecule Structure, Centro Nacional de Biotecnologia, CSIC, Campus Universidad Autónoma, Darwin 3, 28049 Madrid, Spain.
Desiderio OrdoñoDepartment of Macromolecule Structure, Centro Nacional de Biotecnologia, CSIC, Campus Universidad Autónoma, Darwin 3, 28049 Madrid, Spain.
César SantiagoDepartment of Macromolecule Structure, Centro Nacional de Biotecnologia, CSIC, Campus Universidad Autónoma, Darwin 3, 28049 Madrid, Spain.
Luis EnjuanesDepartment of Molecular Biology, Centro Nacional de Biotecnologia, CSIC, Campus Universidad Autonoma, Darwin 3, 28049 Madrid, Spain.
José M CasasnovasDepartment of Macromolecule Structure, Centro Nacional de Biotecnologia, CSIC, Campus Universidad Autónoma, Darwin 3, 28049 Madrid, Spain.
Centro Nacional de Biotecnología · ES

Funding

PHS HHS W000151845
6 · The paper itself

Abstract

The N-terminal S1 region of the transmissible gastroenteritis virus (TGEV) spike (S) glycoprotein contains four antigenic sites (C, B, D and A, from the N- to the C-terminal end) and is engaged in host-cell receptor recognition. The most N-terminal portion of the S1 region, which comprises antigenic sites C and B, is needed for the enteric tropism of TGEV, whereas the major antigenic site A at the C-terminal moiety is required for both respiratory and enteric cell tropism, and is engaged in recognition of the aminopeptidase N (APN) receptor. This study determined the kinetics for binding of a soluble S1 protein to the APN protein. Moreover, the S1 region of the TGEV S protein was dissected, with the aim of identifying discrete modules displaying unique antigenic sites and receptor-binding functions. Following protease treatments and mammalian cell expression methods, four modules or domains (D1-D4) were defined at the S1 region. Papain treatment identified an N-terminal domain (D1) resistant to proteolysis, whereas receptor binding defined a soluble and functional APN receptor-binding domain (D3). This domain was recognized by neutralizing antibodies belonging to the antigenic site A and therefore could be used as an immunogen for the prevention of viral infection. The organization of the four modules in the S1 region of the TGEV S glycoprotein is discussed.

Indexed as

AnimalsCD13 AntigensCell LineEpitopesHumansMembrane GlycoproteinsProtein BindingProtein Structure, TertiaryReceptors, VirusSpike Glycoprotein, CoronavirusTransmissible gastroenteritis virusViral Envelope ProteinsCD13 AntigensEpitopesMembrane GlycoproteinsReceptors, VirusSpike Glycoprotein, Coronavirusspike glycoprotein, SARS-CoVspike protein, mouse hepatitis virusViral Envelope Proteins

Identifiers

PMID21228126
PMCPMC3139418
OpenAlexW2079459677

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.