Evidence map›Paper›PMID 21224891›Full record

ArticleEuropean journal of human genetics : EJHG2011

Evidence for RPGRIP1 gene as risk factor for primary open angle glaucoma.

Lorena Fernández-Martínez, Stef Letteboer, Christian Y Mardin, Nicole Weisschuh, Eugen Gramer, Bernhard Hf Weber, Bernd Rautenstrauss, Paulo A Ferreira, Friedrich E Kruse, André Reis and 2 more

Abstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  16. Normal-tension glaucoma: Pathogenesis and genetics.Experimental and therapeutic medicine · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Lorena Fernández-MartínezInstitute of Human Genetics, Friedrich-Alexander University of Erlangen-Nuremberg, Erlangen, Germany.
Stef Letteboer
Christian Y Mardin
Nicole Weisschuh
Eugen Gramer
Bernhard Hf Weber
Bernd Rautenstrauss
Paulo A Ferreira
Friedrich E Kruse
André Reis
Ronald Roepman
Francesca Pasutto

Funding

VISION RESEARCHP30EY005722 · NEI · DUKE UNIVERSITY · PI Vadim Y Arshavsky · 1985 to 2026
$19.3M
Genetic and Molecular Analyses of Protein Biogenesis in the NeuroretinaR01EY019492 · NEI · DUKE UNIVERSITY · PI FERREIRA, PAULO A · 2010 to 2013
$1.5M
Genetic and Molecular Dissection of RanBP2-Mediated RanGTPase FunctionsR01GM083165 · NIGMS · DUKE UNIVERSITY · PI FERREIRA, PAULO A · 2010 to 2013
$1.4M
NEI NIH HHS 2P30-EY005722NEI NIH HHS EY019492NEI NIH HHS P30 EY005722NEI NIH HHS R01 EY019492NIGMS NIH HHS GM083165NIGMS NIH HHS R01 GM083165
6 · The paper itself

Abstract

Glaucoma is a genetically heterogeneous disorder and is the second cause of blindness worldwide owing to the progressive degeneration of retinal ganglion neurons. Very few genes causing glaucoma were identified to this date. In this study, we screened 10 candidate genes of glaucoma between the D14S261 and D14S121 markers of chromosome 14q11, a critical region previously linked to primary open-angle glaucoma (POAG). Mutation analyses of two large cohorts of patients with POAG, normal tension glaucoma (NTG) and juvenile open-angle glaucoma (JOAG), and control subjects, found only association of non-synonymous heterozygous variants of the retinitis pigmentosa GTPase regulator-interacting protein 1 (RPGRIP1) with POAG, NTG and JOAG. The 20 non-synonymous variants identified in RPGRIP1 were all distinct from variants causing photoreceptor dystrophies and were found throughout all but one domain (RPGR-interacting domain) of RPGRIP1. Among them, 14 missense variants clustered within or around the C2 domains of RPGRIP1. Yeast two-hybrid analyses of a subset of the missense mutations within the C2 domains of RPGRIP1 shows that five of them (p.R598Q, p.A635G, p.T806I, p.A837G and p.I838V) decrease the association of the C2 domains with nephrocystin-4 (NPHPH). When considering only these five confirmed C2-domain mutations, the association remains statistically significant (P=0.001). Altogether, the data support that heterozygous non-synonymous variants of RPGRIP1 may cause or increase the susceptibility to various forms of glaucoma and that among other factors, physical impairment of the interaction of RPGRIP1with different proteins may contribute to the pathogenesis of forms of glaucoma.

Indexed as

AdolescentAdultAgedAged, 80 and overBlindnessCytoskeletal ProteinsDNA Mutational AnalysisFemaleGenetic Association StudiesGlaucoma, Open-AngleHeterozygoteHumansIntraocular PressureLow Tension GlaucomaMaleMiddle AgedCytoskeletal ProteinsProteinsRPGRIP1 protein, human

Identifiers

PMID21224891
PMCPMC3060327

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.