ArticleFaraday discussions2011
Single-cell analysis of phosphoinositide 3-kinase and phosphatase and tensin homolog activation.
Article in Faraday discussions, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
11 citing papers in PubMed, 19 citations in OpenAlex.
- "Fix and assay": separating in-cellulo sphingolipid reactions from analytical assay in time and space using an aldehyde-based fixative.The Analyst · 2019Article
- Design and Application of Sensors for Chemical Cytometry.ACS chemical biology · 2018Review
- Chemical fixation to arrest phospholipid signaling for chemical cytometry.Journal of chromatography. A · 2017Article
- Required hydrophobicity of fluorescent reporters for phosphatidylinositol family of lipid enzymes.Analytical and bioanalytical chemistry · 2017Article
- Response of single leukemic cells to peptidase inhibitor therapy across time and dose using a microfluidic device.Integrative biology : quantitative biosciences from nano to macro · 2014Article
- Measuring activity in the ubiquitin-proteasome system: from large scale discoveries to single cells analysis.Cell biochemistry and biophysics · 2013Review
- Automated capillary electrophoresis system for fast single-cell analysis.Analytical chemistry · 2013Article
- Phosphoinositide 3-kinase couples NMDA receptors to superoxide release in excitotoxic neuronal death.Cell death & disease · 2013Article
- Separation of fluorescently labeled phosphoinositides and sphingolipids by capillary electrophoresis.Journal of chromatography. B, Analytical technologies in the biomedical and life sciences · 2012Article
- Sample transport and electrokinetic injection in a microchip device for chemical cytometry.Electrophoresis · 2011Article
- Measuring enzyme activity in single cells.Trends in biotechnology · 2011Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors at 1 institution in 1 country.
Funding
Abstract
A single-cell assay was developed to measure the activation of phosphoinositide 3-kinase (PI3K) using microanalytical chemical separations and a fluorescently labeled lipid substrate. Phosphatidyl-inositol 4,5 bisphosphate labeled on its acyl chain with Bodipy fluorescein (Bodipy Fl PIP(2)) was utilized as a substrate for both in vitro and cell-based assays. Detection limits for the substrate and product of the PI3K reaction were 10 to 20 zeptomol. In vitro assays with PI3K with and without pharmacologic inhibitors demonstrated that Bodipy Fl PIP(2) was converted to phosphatidyl-inositol 3,4,5 trisphosphate (Bodipy Fl PIP(3)). Bodipy Fl PIP(3) could be back converted to Bodipy Fl PIP(2) by the phosphatase PTEN. When Bodipy Fl PIP(2) was added to a cell lysate, 1.4 fmol of the Bodipy Fl PIP(3) were produced per ng of protein in the cytoplasmic extract in 10 min. Addition of Bodipy Fl PIP(3) to a cell lysate yielded 3 fmol of Bodipy Fl PIP(2) per ng of protein in 8 min. Both Bodipy Fl PIP(2) and Bodipy Fl PIP(3) were measureable in single cells and the two species could be inter-converted. Under the appropriate conditions, a fluorescent diacylglycerol was also detected in single cells. When the FcepsilonR 1 receptor on the cells loaded with the fluorescent lipid was cross-linked, the amount of Bodipy Fl PIP(3) generated per cell increased 4-fold over that of unstimulated cells. This production of Bodipy Fl PIP(3) was blocked by wortmannin. Chemical cytometry utilizing the fluorescent lipids will be of value in understanding lipid metabolism at the single-cell level.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.