Evidence map›Paper›PMID 21221426›Full record

ArticleFaraday discussions2011

Single-cell analysis of phosphoinositide 3-kinase and phosphatase and tensin homolog activation.

Dechen Jiang, Christopher Eldridge Sims, Nancy Lynn Allbritton

Abstract read
In one paragraph

Article in Faraday discussions, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Separation of fluorescently labeled phosphoinositides and sphingolipids by capillary electrophoresis.Journal of chromatography. B, Analytical technologies in the biomedical and life sciences · 2012
    Article
  10. Article
  11. Measuring enzyme activity in single cells.Trends in biotechnology · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Dechen JiangDepartment of Chemistry, University of North Carolina, Chapel Hill, NC 27599, USA.
Christopher Eldridge Sims
Nancy Lynn Allbritton
University of North Carolina at Chapel Hill · US

Funding

Multiplexed Measurement of Kinase Activity in Single Cancer CellsR01CA139599 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ALLBRITTON, NANCY L. · 2009 to 2013
$2.7M
Signaling Network Dynamics in Metastatic Prostate CancerR01CA140173 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LAWRENCE, DAVID S. · 2009 to 2013
$2.0M
NCI NIH HHS CA139599NCI NIH HHS CA140173NCI NIH HHS R01 CA139599NCI NIH HHS R01 CA140173
6 · The paper itself

Abstract

A single-cell assay was developed to measure the activation of phosphoinositide 3-kinase (PI3K) using microanalytical chemical separations and a fluorescently labeled lipid substrate. Phosphatidyl-inositol 4,5 bisphosphate labeled on its acyl chain with Bodipy fluorescein (Bodipy Fl PIP(2)) was utilized as a substrate for both in vitro and cell-based assays. Detection limits for the substrate and product of the PI3K reaction were 10 to 20 zeptomol. In vitro assays with PI3K with and without pharmacologic inhibitors demonstrated that Bodipy Fl PIP(2) was converted to phosphatidyl-inositol 3,4,5 trisphosphate (Bodipy Fl PIP(3)). Bodipy Fl PIP(3) could be back converted to Bodipy Fl PIP(2) by the phosphatase PTEN. When Bodipy Fl PIP(2) was added to a cell lysate, 1.4 fmol of the Bodipy Fl PIP(3) were produced per ng of protein in the cytoplasmic extract in 10 min. Addition of Bodipy Fl PIP(3) to a cell lysate yielded 3 fmol of Bodipy Fl PIP(2) per ng of protein in 8 min. Both Bodipy Fl PIP(2) and Bodipy Fl PIP(3) were measureable in single cells and the two species could be inter-converted. Under the appropriate conditions, a fluorescent diacylglycerol was also detected in single cells. When the FcepsilonR 1 receptor on the cells loaded with the fluorescent lipid was cross-linked, the amount of Bodipy Fl PIP(3) generated per cell increased 4-fold over that of unstimulated cells. This production of Bodipy Fl PIP(3) was blocked by wortmannin. Chemical cytometry utilizing the fluorescent lipids will be of value in understanding lipid metabolism at the single-cell level.

Indexed as

1-Phosphatidylinositol 4-KinaseAnimalsCell Line, TumorFluorescent DyesMicroscopy, FluorescencePhosphatidylinositol PhosphatesPTEN PhosphohydrolaseRatsSingle-Cell Analysis1-Phosphatidylinositol 4-KinaseFluorescent DyesPhosphatidylinositol PhosphatesPTEN Phosphohydrolase

Identifiers

PMID21221426
PMCPMC3017462
OpenAlexW2039662548

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.