Evidence map›Paper›PMID 21220762›Full record

ArticlePlant physiology2011

Cloning and characterization of purple acid phosphatase phytases from wheat, barley, maize, and rice.

Giuseppe Dionisio, Claus K Madsen, Preben B Holm, Karen G Welinder, Malene Jørgensen, Eva Stoger, Elsa Arcalis, Henrik Brinch-Pedersen

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
11.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 117 citations in OpenAlex.

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  10. Barley Nepenthesin-Like Aspartic ProteaseFrontiers in plant science · 2021
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  12. Biofortification and bioavailability of Zn, Fe and Se in wheat: present status and future prospects.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Review
  13. Article
  14. Globoids and Phytase: The Mineral Storage and Release System in Seeds.International journal of molecular sciences · 2020
    Review
  15. Horizontal Stacking ofFrontiers in plant science · 2020
    Article
  16. Article
  17. Article
  18. Molecular Advances on Phytases in Barley and Wheat.International journal of molecular sciences · 2019
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Giuseppe DionisioFaculty of Agricultural Sciences, Department of Genetics and Biotechnology, Research Centre Flakkebjerg, Aarhus University, DK-4200 Slagelse, Denmark.
Claus K Madsen
Preben B Holm
Karen G Welinder
Malene Jørgensen
Eva Stoger
Elsa Arcalis
Henrik Brinch-Pedersen
BOKU University · ATAalborg University · DKAarhus University · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Barley (Hordeum vulgare) and wheat (Triticum aestivum) possess significant phytase activity in the mature grains. Maize (Zea mays) and rice (Oryza sativa) possess little or virtually no preformed phytase activity in the mature grain and depend fully on de novo synthesis during germination. Here, it is demonstrated that wheat, barley, maize, and rice all possess purple acid phosphatase (PAP) genes that, expressed in Pichia pastoris, give fully functional phytases (PAPhys) with very similar enzyme kinetics. Preformed wheat PAPhy was localized to the protein crystalloid of the aleurone vacuole. Phylogenetic analyses indicated that PAPhys possess four conserved domains unique to the PAPhys. In barley and wheat, the PAPhy genes can be grouped as PAPhy_a or PAPhy_b isogenes (barley, HvPAPhy_a, HvPAPhy_b1, and HvPAPhy_b2; wheat, TaPAPhy_a1, TaPAPhy_a2, TaPAPhy_b1, and TaPAPhy_b2). In rice and maize, only the b type (OsPAPhy_b and ZmPAPhy_b, respectively) were identified. HvPAPhy_a and HvPAPhy_b1/b2 share 86% and TaPAPhya1/a2 and TaPAPhyb1/b2 share up to 90% (TaPAPhy_a2 and TaPAPhy_b2) identical amino acid sequences. despite of this, PAPhy_a and PAPhy_b isogenes are differentially expressed during grain development and germination. In wheat, it was demonstrated that a and b isogene expression is driven by different promoters (approximately 31% identity). TaPAPhy_a/b promoter reporter gene expression in transgenic grains and peptide mapping of TaPAPhy purified from wheat bran and germinating grains confirmed that the PAPhy_a isogene set present in wheat/barley but not in rice/maize is the origin of high phytase activity in mature grains.

Indexed as

6-PhytaseAcid PhosphataseAmino Acid SequenceCloning, MolecularDNA, ComplementaryGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGerminationGlycoproteinsHordeumKineticsMolecular Sequence DataOryzaPhylogenyPlantsSeeds6-PhytaseAcid PhosphataseDNA, ComplementaryGlycoproteinspurple acid phosphatase

Identifiers

PMID21220762
PMCPMC3135953
OpenAlexW2103797224

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.