Evidence map›Paper›PMID 21220532›Full record

ArticleAntimicrobial agents and chemotherapy2011

Importance of position 170 in the inhibition of GES-type β-lactamases by clavulanic acid.

Hilary Frase, Marta Toth, Matthew M Champion, Nuno T Antunes, Sergei B Vakulenko

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Laboratory Variants GESAntimicrobial agents and chemotherapy · 2021
    Article
  6. Article
  7. Article
  8. Review
  9. The intrinsic resistome of bacterial pathogens.Frontiers in microbiology · 2013
    Article
  10. Article
  11. Article
  12. Article
  13. The class A β-lactamase FTU-1 is native to Francisella tularensis.Antimicrobial agents and chemotherapy · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hilary FraseDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, USA.
Marta Toth
Matthew M Champion
Nuno T Antunes
Sergei B Vakulenko
University of Notre Dame · US

Funding

Class A CarbapenemasesR01AI089726 · NIAID · UNIVERSITY OF NOTRE DAME · PI VAKULENKO, SERGEI · 2011 to 2015
$1.8M
NIAID NIH HHS R01 AI089726
6 · The paper itself

Abstract

Bacterial resistance to β-lactam antibiotics (penicillins, cephalosporins, carbapenems, etc.) is commonly the result of the production of β-lactamases. The emergence of β-lactamases capable of turning over carbapenem antibiotics is of great concern, since these are often considered the last resort antibiotics in the treatment of life-threatening infections. β-Lactamases of the GES family are extended-spectrum enzymes that include members that have acquired carbapenemase activity through a single amino acid substitution at position 170. We investigated inhibition of the GES-1, -2, and -5 β-lactamases by the clinically important β-lactamase inhibitor clavulanic acid. While GES-1 and -5 are susceptible to inhibition by clavulanic acid, GES-2 shows the greatest susceptibility. This is the only variant to possess the canonical asparagine at position 170. The enzyme with asparagine, as opposed to glycine (GES-1) or serine (GES-5), then leads to a higher affinity for clavulanic acid (K(i) = 5 μM), a higher rate constant for inhibition, and a lower partition ratio (r ≈ 20). Asparagine at position 170 also results in the formation of stable complexes, such as a cross-linked species and a hydrated aldehyde. In contrast, serine at position 170 leads to formation of a long-lived trans-enamine species. These studies provide new insight into the importance of the residue at position 170 in determining the susceptibility of GES enzymes to clavulanic acid.

Indexed as

beta-Lactamase InhibitorsAnti-Bacterial AgentsAsparaginebeta-LactamasesChromatography, LiquidClavulanic AcidEnzyme InhibitorsGlycineMicrobial Sensitivity TestsSerineSpectrometry, Mass, Electrospray IonizationStructure-Activity RelationshipAnti-Bacterial AgentsAsparaginebeta-Lactamase Inhibitorsbeta-LactamasesClavulanic AcidEnzyme InhibitorsGlycineSerine

Identifiers

PMID21220532
PMCPMC3067162
OpenAlexW2014440920

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.