Evidence map›Paper›PMID 21220418›Full record

ArticleThe Journal of biological chemistry2011

The Ca2+ channel beta4c subunit interacts with heterochromatin protein 1 via a PXVXL binding motif.

Xingfu Xu, Yoon J Lee, Johanna B Holm, Mark D Terry, Robert E Oswald, William A Horne

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 28 citations in OpenAlex.

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  17. Ca2+-dependent transcriptional control of Ca2+ homeostasis.The Journal of biological chemistry · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xingfu XuDepartment of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853, USA.
Yoon J Lee
Johanna B Holm
Mark D Terry
Robert E Oswald
William A Horne
Colorado State University · USCornell University · US

Funding

Calcium Channel Gating: It Matters How You Splice It.R01NS042600 · NINDS · CORNELL UNIVERSITY · PI HORNE, WILLIAM ALAN · 2003 to 2006
$1.1M
NINDS NIH HHS NS42600NINDS NIH HHS R01 NS042600
6 · The paper itself

Abstract

The β subunits of voltage-gated Ca(2+) channels are best known for their roles in regulating surface expression and gating of voltage-gated Ca(2+) channel α(1) subunits. Recent evidence, however, indicates that these proteins have a variety of Ca(2+) channel-independent functions. For example, on the molecular level, they regulate gene expression, and on the whole animal level, they regulate early cell movements in zebrafish development. In the present study, an alternatively spliced, truncated β4 subunit (β4c) is identified in the human brain and shown to be highly expressed in nuclei of vestibular neurons. Pull-down assays, nuclear magnetic resonance, and isothermal titration calorimetry demonstrate that the protein interacts with the chromo shadow domain (CSD) of heterochromatin protein 1γ. Site-directed mutagenesis reveals that the primary CSD interaction occurs through a β4c C-terminal PXVXL consensus motif, adding the β4c subunit to a growing PXVXL protein family with epigenetic responsibilities. These proteins have multiple nuclear functions, including transcription regulation (TIF1α) and nucleosome assembly (CAF1). An NMR-based two-site docking model of β4c in complex with dimerized CSD is presented. Possible roles for the interaction are discussed.

Indexed as

Alternative SplicingAnimalsCalcium ChannelsCell NucleusChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneExoribonucleasesHumansMiceMutagenesis, Site-DirectedNerve Tissue ProteinsNeuronsNuclear ProteinsProtein BindingProteinsRepressor ProteinsCACNB4 protein, humanCalcium ChannelsCBX3 protein, humanChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneCnot7 protein, mouseCNOT8 protein, humanExoribonucleasesNerve Tissue ProteinsNuclear ProteinsProteinsRepressor ProteinsRibonucleasestranscriptional intermediary factor 1Transcription Factors

Identifiers

PMID21220418
PMCPMC3058963
OpenAlexW2016995614

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.