Evidence map›Paper›PMID 21220329›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Absence of keratin 8 confers a paradoxical microflora-dependent resistance to apoptosis in the colon.

Aida Habtezion, Diana M Toivola, M Nadeem Asghar, Greg S Kronmal, Jacqueline D Brooks, Eugene C Butcher, M Bishr Omary

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Roles of Keratins in Intestine.International journal of molecular sciences · 2022
    Review
  3. Article
  4. αMolecular cancer research : MCR · 2019
    Article
  5. Review
  6. Epithelial Keratins Modulate cMet Expression and Signaling and Promote InlB-MediatedFrontiers in cellular and infection microbiology · 2018
    Article
  7. Article
  8. Article
  9. Review
  10. Intermediate filament proteins of digestive organs: physiology and pathophysiology.American journal of physiology. Gastrointestinal and liver physiology · 2017
    Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Keratin 8 knockdown leads to loss of the chloride transporter DRA in the colon.American journal of physiology. Gastrointestinal and liver physiology · 2016
    Article
  16. Absence of keratin 8 or 18 promotes antimitochondrial autoantibody formation in aging male mice.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2015
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Aida HabtezionDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109, USA. aidah@stanford.edu
Diana M Toivola
M Nadeem Asghar
Greg S Kronmal
Jacqueline D Brooks
Eugene C Butcher
M Bishr Omary
Åbo Akademi University · FIUniversity of Michigan–Ann Arbor · USGenomic Health (United States) · USStanford University · US

Funding

University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OWYANG, CHUNG · 1986 to 2021
$22.5M
Proteomics/GenomicsP30DK056339 · NIDDK · STANFORD UNIVERSITY · PI GREENBERG, HARRY BERNARD · 2001 to 2010
$10.4M
Keratin Biology and Disease Aspects in Simple EpitheliaR01DK047918 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OMARY, BISHR · 1995 to 2018
$6.6M
A Novel Tolergenic Dendritic Cell: Biology & Therapeutic PotentialR01DK084647 · NIDDK · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI BUTCHER, EUGENE C · 2009 to 2013
$1.5M
Lymphocyte Homing Mechanisms in Normal & Inflamed ColonK08DK069385 · NIDDK · STANFORD UNIVERSITY · PI HABTEZION, AIDA · 2006 to 2010
$714k
NIDDK NIH HHS DK34933NIDDK NIH HHS DK56339NIDDK NIH HHS K08 DK069385NIDDK NIH HHS P30 DK034933NIDDK NIH HHS P30 DK056339NIDDK NIH HHS R01 DK047918NIDDK NIH HHS R01 DK084647NIDDK NIH HHS R01 DK47918
6 · The paper itself

Abstract

Keratin 8 (K8) is a major intermediate filament protein present in enterocytes and serves an antiapoptotic function in hepatocytes. K8-null mice develop colonic hyperplasia and colitis that are reversed after antibiotic treatment. To investigate the pathways that underlie the mechanism of colonocyte hyperplasia and the normalization of the colonic phenotype in response to antibiotics, we performed genome-wide microarray analysis. Functional annotation of genes that are differentially regulated in K8(-/-) and K8(+/+) isolated colon crypts (colonocytes) identified apoptosis as a major altered pathway. Exposure of K8(-/-) colonocytes or colon organ ("organoid") cultures, but not K8(-/-) small intestine organoid cultures, to apoptotic stimuli showed, surprisingly, that they are resistant to apoptosis compared with their wild-type counterparts. This resistance is not related to inflammation per se because T-cell receptor α-null (TCR-α(-/-)) and wild-type colon cultures respond similarly upon induction of apoptosis. Following antibiotic treatment, K8(-/-) colonocytes and organ cultures become less resistant to apoptosis and respond similarly to the wild-type colonocytes. Antibiotics also normalize most differentially up-regulated genes, including survivin and β4-integrin. Treatment of K8(-/-) mice with anti-β4-integrin antibody up-regulated survivin, and induced phosphorylation of focal adhesion kinase with decreased activation of caspases. Therefore, unlike the proapoptotic effect of K8 mutation or absence in hepatocytes, lack of K8 confers resistance to colonocyte apoptosis in a microflora-dependent manner.

Indexed as

AnimalsAnti-Bacterial AgentsAntibodiesApoptosisCell LineCell ProliferationCells, CulturedColonDrug ResistanceFemaleFocal Adhesion Kinase 1Gene Expression ProfilingImipenemImmunoblottingInhibitor of Apoptosis ProteinsIn Situ Nick-End LabelingAnti-Bacterial AgentsAntibodiesBirc5 protein, mouseFocal Adhesion Kinase 1ImipenemInhibitor of Apoptosis ProteinsIntegrin beta4Keratin-8Ptk2 protein, mouseRepressor ProteinsSurvivinVancomycin

Identifiers

PMID21220329
PMCPMC3029736
OpenAlexW2071597617

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.