Evidence map›Paper›PMID 21220114›Full record

ArticleStructure (London, England : 1993)2011

Helix 11 dynamics is critical for constitutive androstane receptor activity.

Edward Wright, Scott A Busby, Sarah Wisecarver, Jeremy Vincent, Patrick R Griffin, Elias J Fernandez

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Structure (London, England : 1993), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Increased Molecular Flexibility Widens the Gap betweenACS medicinal chemistry letters · 2022
    Article
  4. Noncanonical Constitutive Androstane Receptor Signaling in Gene Regulation.International journal of molecular sciences · 2020
    Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Regulation of PXR and CAR by protein-protein interaction and signaling crosstalk.Expert opinion on drug metabolism & toxicology · 2016
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Structural basis for negative cooperativity within agonist-bound TR:RXR heterodimers.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Edward WrightBiochemistry, Cellular and Molecular Biology, University of Tennessee, Knoxville, TN 37996, USA.
Scott A Busby
Sarah Wisecarver
Jeremy Vincent
Patrick R Griffin
Elias J Fernandez
University of Tennessee at Knoxville · USScripps Research Institute · US

Funding

UHTS Implementation(Florida)U54MH084512 · NIMH · SCRIPPS RESEARCH INSTITUTE, THE · PI SCHURER, STEPHAN C · 2008 to 2013
$89.2M
Development of H/D exchange technology for the study of large protein complexesR01GM084041 · NIGMS · SCRIPPS FLORIDA · PI GRIFFIN, PATRICK ROBERT · 2009 to 2012
$1.6M
Structure-Function Relationship of CARR01DK066394 · NIDDK · UNIVERSITY OF TENNESSEE KNOXVILLE · PI FERNANDEZ, ELIAS J · 2005 to 2008
$962k
Acquisition of a LTQ/Orbitrap MS to advance the study of protein dynamicsS10RR027270 · NCRR · SCRIPPS RESEARCH INSTITUTE, THE · PI GRIFFIN, PATRICK ROBERT · 2010 to 2010
$500k
NCRR NIH HHS S10 RR027270NIDDK NIH HHS DK066394NIDDK NIH HHS R01 DK066394NIGMS NIH HHS R01 GM084041NIMH NIH HHS U54 MH084512
6 · The paper itself

Abstract

The constitutive androstane receptor (CAR) transactivation can occur in the absence of exogenous ligand and this activity is enhanced by agonists TCPOBOP and meclizine. We use biophysical and cell-based assays to show that increased activity of CAR(TCPOBOP) relative to CAR(meclizine) corresponds to a higher affinity of CAR(TCPOBOP) for the steroid receptor coactivator-1. Additionally, steady-state fluorescence spectra suggest conformational differences between CAR(TCPOBOP):RXR and CAR(meclizine):RXR. Hydrogen/deuterium exchange (HDX) data indicate that the CAR activation function 2 (AF-2) is more stable in CAR(TCPOBOP):RXR and CAR(meclizine):RXR than in CAR:RXR. HDX kinetics also show significant differences between CAR(TCPOBOP):RXR and CAR(meclizine):RXR. Unlike CAR(meclizine):RXR, CAR(TCPOBOP):RXR shows a higher overall stabilization that extends into RXR. We identify residues 339-345 in CAR as an allosteric regulatory site with a greater magnitude reduction in exchange kinetics in CAR(TCPOBOP):RXR than CAR(meclizine):RXR. Accordingly, assays with mutations on CAR at leucine-340 and leucine-343 confirm this region as an important determinant of CAR activity.

Indexed as

Allosteric SiteAnimalsBinding SitesConstitutive Androstane ReceptorHumansMeclizineMiceModels, MolecularNuclear Receptor Coactivator 1Protein BindingProtein MultimerizationProtein StabilityProtein Structure, SecondaryProtein Structure, TertiaryPyridinesReceptors, Cytoplasmic and Nuclear1,4-bis(2-(3,5-dichloropyridyloxy))benzeneConstitutive Androstane ReceptorMeclizineNuclear Receptor Coactivator 1PyridinesReceptors, Cytoplasmic and NuclearRecombinant Fusion ProteinsRetinoid X Receptors

Identifiers

PMID21220114
PMCPMC3032979
OpenAlexW1973902029

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.