Evidence map›Paper›PMID 21219404›Full record

ArticleBritish journal of clinical pharmacology2011

Influence of polymorphisms within the methotrexate pathway genes on the toxicity and efficacy of methotrexate in patients with juvenile idiopathic arthritis.

Masakatsu Yanagimachi, Takuya Naruto, Takuma Hara, Masako Kikuchi, Ryoki Hara, Takako Miyamae, Tomoyuki Imagawa, Masaaki Mori, Tetsuji Kaneko, Satoshi Morita and 2 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in British journal of clinical pharmacology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03006991 (Individual Study of Methotrexate Based on Pharmacogenomics and Pharmacometrics), which is not on this map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03006991 unknown statusnot on this mapstarted 2016, after this paper: background citation

Individual Study of Methotrexate Based on Pharmacogenomics and Pharmacometrics

TypeobservationalSponsorGuangzhou Women and Children's Medical CenterRan2016 to 2023Enrolled100ConditionsJuvenile Idiopathic ArthritisArmstherapeutic drug monitoring
3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Masakatsu YanagimachiDepartment of Pediatrics, Yokohama City University Graduate School of Medicine, Kanazawa-ku, Yokohama 236-0004, Japan. m-yanagi@mvi.biglobe.ne.jp
Takuya Naruto
Takuma Hara
Masako Kikuchi
Ryoki Hara
Takako Miyamae
Tomoyuki Imagawa
Masaaki Mori
Tetsuji Kaneko
Satoshi Morita
Hiroaki Goto
Shumpei Yokota
Yokohama City University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimsWe investigated whether several polymorphisms within the methotrexate (MTX) pathway genes were related to the toxicity and efficacy of MTX in 92 Japanese patients with articular-type juvenile idiopathic arthritis (JIA).

methodsEight gene polymorphisms within the MTX pathway genes, namely, RFC, BCRP, MTHFR (two), FPGS, γ-glutamyl hydrolase (GGH; two) and ATIC, were genotyped using TaqMan assays. Liver dysfunction was defined as an increase in alanine transaminase to five times the normal upper limit. Non-responders to MTX were defined as patients refractory to MTX and were therefore treated with biologics.

resultsThe non-TT genotype at GGH T16C was associated with a high risk of liver dysfunction (P=0.028, odds ratio=6.90, 95% confidence interval 1.38-34.5), even after adjustment for the duration of MTX treatment. A longer interval from disease onset to treatment (8.5 and 21.3 months, P=0.029) and rheumatoid factor positivity (P=0.026, odds ratio=2.87, 95% confidence interval 1.11-7.39) were associated with lower efficacy of MTX.

conclusionsThe non-TT genotype at GGH T16C was associated with a high risk of liver dysfunction, presumably because the C allele of GGH C16T may reduce the activity of GGH. The time interval before MTX treatment and rheumatoid factor positivity were associated with the efficacy of MTX treatment. The pharmacogenetics of the MTX pathway genes affects the toxicity and efficacy of MTX in Japanese JIA patients.

Indexed as

Polymorphism, Single NucleotideAntirheumatic AgentsArthritis, JuvenileChildFemaleGene FrequencyGenotypeHumansLiverMaleMethotrexateTreatment OutcomeAntirheumatic AgentsMethotrexate

Identifiers

PMID21219404
PMCPMC3040544
OpenAlexW1493175169

What OpenQuestion holds

Textmetadata
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.