Evidence map›Paper›PMID 21216150›Full record

ArticleBioorganic & medicinal chemistry2011

Inhibition of secreted phospholipases A₂ by 2-oxoamides based on α-amino acids: Synthesis, in vitro evaluation and molecular docking calculations.

Varnavas D Mouchlis, Victoria Magrioti, Efrosini Barbayianni, Nathan Cermak, Rob C Oslund, Thomas M Mavromoustakos, Michael H Gelb, George Kokotos

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
  2. Article
  3. Small-molecule inhibitors as potential therapeutics and as tools to understand the role of phospholipases ABiochimica et biophysica acta. Molecular and cell biology of lipids · 2019
    Review
  4. Phospholipase ABiochimica et biophysica acta. Molecular and cell biology of lipids · 2019
    Review
  5. Design of Selective sPLAACS medicinal chemistry letters · 2018
    Article
  6. Article
  7. Review of four major distinct types of human phospholipase AAdvances in biological regulation · 2018
    Review
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Varnavas D MouchlisDepartment of Chemistry, University of Athens, Greece.
Victoria Magrioti
Efrosini Barbayianni
Nathan Cermak
Rob C Oslund
Thomas M Mavromoustakos
Michael H Gelb
George Kokotos

Funding

Biochemistry of Protein PrenylationR01AI054384 · NIAID · UNIVERSITY OF WASHINGTON · PI BUCKNER, FREDERICK SIMMONS, GELB, MICHAEL H · 2003 to 2012
$5.3M
Biochemical Studies of 14-kDa Phospholipases A2R37HL036235 · NHLBI · UNIVERSITY OF WASHINGTON · PI GELB, MICHAEL H · 2007 to 2016
$4.1M
Regulation and Function of Cytosolic Phospholipase A2R01HL050040 · NHLBI · UNIVERSITY OF WASHINGTON · PI GELB, MICHAEL H · 1993 to 2012
$2.4M
STUDIES IN ENZYMOLOGY USING INHIBITORSR01HL036235 · NHLBI · UNIVERSITY OF WASHINGTON · PI GELB, MICHAEL H · 1989 to 2006
$2.1M
BIOCHEMISTRY OF PROTEIN PRENYLATIONR01CA052874 · NCI · UNIVERSITY OF WASHINGTON · PI GELB, MICHAEL H · 1991 to 2002
$836k
RATIONALLY-DESIGNED INHIBITORS OF PHOSPHOLIPASE-A2R23HL036235 · NHLBI · UNIVERSITY OF WASHINGTON · PI GELB, MICHAEL H · 1986 to 1988
–
NCI NIH HHS R01 CA052874NHLBI NIH HHS HL36235NHLBI NIH HHS R01 HL036235NHLBI NIH HHS R01 HL050040NHLBI NIH HHS R37 HL036235NIAID NIH HHS R01 AI054384
6 · The paper itself

Abstract

Group IIA secreted phospholipase A₂ (GIIA sPLA₂) is a member of the mammalian sPLA₂ enzyme family and is associated with various inflammatory conditions. In this study, the synthesis of 2-oxoamides based on α-amino acids and the in vitro evaluation against three secreted sPLA₂s (GIIA, GV and GX) are described. The long chain 2-oxoamide GK126 based on the amino acid (S)-leucine displayed inhibition of human and mouse GIIA sPLA₂s (IC₅₀ 300nM and 180nM, respectively). It also inhibited human GV sPLA₂ with similar potency, while it did not inhibit human GX sPLA₂. The elucidation of the stereoelectronic characteristics that affect the in vitro activity of these compounds was achieved by using a combination of simulated annealing to sample low-energy conformations before the docking procedure, and molecular docking calculations.

Indexed as

Amino AcidsAnimalsBinding SitesCatalytic DomainComputer SimulationEnzyme InhibitorsHumansMicePhospholipases A2, SecretoryPyridinesAmino AcidsEnzyme InhibitorsoxoamidePhospholipases A2, SecretoryPyridines

Identifiers

PMID21216150
PMCPMC3050527

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.