Evidence map›Paper›PMID 21215266›Full record

ArticleDevelopmental biology2011

Functional analysis of Rfx6 and mutant variants associated with neonatal diabetes.

Esther J Pearl, Zeina Jarikji, Marko E Horb

Abstract read
In one paragraph

Article in Developmental biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Review
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  13. Review
  14. Article
  15. Article
  16. Xenopus as a Model for GI/Pancreas Disease.Current pathobiology reports · 2015
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Esther J PearlLaboratory of Molecular Organogenesis, Institut de recherches cliniques de Montréal, 110 avenue des Pins Ouest, Montreal, QC H2V4K1, Canada. esther.pearl@ircm.qc.ca
Zeina Jarikji
Marko E Horb
Centre Hospitalier de l’Université de Montréal · CAMontreal Clinical Research Institute · CA

Funding

Transcriptional Regulatory Networks Controlling Xenopus Pancreas DevelopmentR01DK077197 · NIDDK · MARINE BIOLOGICAL LABORATORY · PI HORB, MARKO E · 2007 to 2011
$1.1M
NIDDK NIH HHS DK077197NIDDK NIH HHS R01 DK077197
6 · The paper itself

Abstract

Mutations in rfx6 were recently associated with Mitchell-Riley syndrome, which involves neonatal diabetes, and other digestive system defects. To better define the function of Rfx6 in early endoderm development we cloned the Xenopus homologue. Expression of rfx6 begins early, showing broad expression throughout the anterior endoderm; at later stages rfx6 expression becomes restricted to the endocrine cells of the gut and pancreas. Morpholino knockdown of rfx6 caused a loss of pancreas marker expression, as well as other abnormalities. Co-injection of exogenous wild-type rfx6 rescued the morpholino phenotype in Xenopus tadpoles, whereas attempts to rescue the loss-of-function phenotype using mutant rfx6 based on Mitchell-Riley patients were unsuccessful. To better define the pleiotropic effects, we performed microarray analyses of gene expression in knockdown foregut tissue. In addition to pancreatic defects, the microarray analyses revealed downregulation of lung, stomach and heart markers and an upregulation of kidney markers. We verified these results using RT-PCR and in situ hybridization. Based on the different rfx6 expression patterns and our functional analyses, we propose that rfx6 has both early and late functions. In early development Rfx6 plays a broad role, being essential for development of most anterior endodermal organs. At later stages however, Rfx6 function is restricted to endocrine cells.

Indexed as

MutationAnimalsBody PatterningDiabetes MellitusDNA-Binding ProteinsEndodermHumansInfant, NewbornInfant, Newborn, DiseasesPancreasRegulatory Factor X Transcription FactorsTranscription FactorsXenopusXenopus ProteinsDNA-Binding ProteinsRegulatory Factor X Transcription FactorsRfx6 protein, humanRfx6 protein, XenopusTranscription FactorsXenopus Proteins

Identifiers

PMID21215266
PMCPMC3042741
OpenAlexW1975075201

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.