Evidence map›Paper›PMID 21212931›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2011

Genetic mapping of DArT markers in the Festuca-Lolium complex and their use in freezing tolerance association analysis.

Jan Bartoš, Simen Rød Sandve, Roland Kölliker, David Kopecký, Pavla Christelová, Stěpán Stočes, Liv Ostrem, Arild Larsen, Andrzej Kilian, Odd-Arne Rognli and 1 more

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. ChlorophyllFrontiers in plant science · 2018
    Article
  3. Article
  4. Article
  5. Article
  6. Development of wild barley (Hordeum chilense)-derived DArT markers and their use into genetic and physical mapping.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jan BartošInstitute of Experimental Botany, Sokolovská 6, 77200, Olomouc, Czech Republic. bartos@ueb.cas.cz
Simen Rød Sandve
Roland Kölliker
David Kopecký
Pavla Christelová
Stěpán Stočes
Liv Ostrem
Arild Larsen
Andrzej Kilian
Odd-Arne Rognli
Jaroslav Doležel

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Species belonging to the Festuca-Lolium complex are important forage and turf species and as such, have been studied intensively. However, their out-crossing nature and limited availability of molecular markers make genetic studies difficult. Here, we report on saturation of F. pratensis and L. multiflorum genetic maps using Diversity Array Technology (DArT) markers and the DArTFest array.The 530 and 149 DArT markers were placed on genetic maps of L. multiflorum and F. pratensis, respectively, with overlap of 20 markers, which mapped in both species. The markers were sequenced and comparative sequence analysis was performed between L. multiflorum, rice and Brachypodium. The utility of the DArTFest array was then tested on a Festulolium population FuRs0357 in an integrated analysis using the DArT marker map positions to study associations between markers and freezing tolerance. Ninety six markers were significantly associated with freezing tolerance and five of these markers were genetically mapped to chromosomes 2, 4 and 7. Three genomic loci associated with freezing tolerance in the FuRs0357 population co-localized with chromosome segments and QTLs previously identified to be associated with freezing tolerance. The present work clearly confirms the potential of the DArTFest array in genetic studies of the Festuca-Lolium complex. The annotated DArTFest array resources could accelerate further studies and improvement of desired traits in Festuca-Lolium species.

Indexed as

FreezingGenetic MarkersAdaptation, PhysiologicalAnimalsBase SequenceBrachypodiumChromosome MappingChromosomes, PlantFestucaGenetic LinkageHumansLoliumMolecular Sequence DataOryzaPolymorphism, GeneticSequence Analysis, DNAGenetic Markers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.