Evidence map›Paper›PMID 21210168›Full record

ArticleExtremophiles : life under extreme conditions2011

Identification and characterization of a unique, zinc-containing transport ATPase essential for natural transformation in Thermus thermophilus HB27.

Ilona Rose, Goran Biuković, Patrick Aderhold, Volker Müller, Gerhard Grüber, Beate Averhoff

Abstract read
PubMed Publisher
In one paragraph

Article in Extremophiles : life under extreme conditions, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. The PulE ATPase is required for twitching motility and DNA donation during Thermus thermophilus transjugation.International microbiology : the official journal of the Spanish Society for Microbiology · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Complete Genome Analysis ofFrontiers in microbiology · 2017
    Article
  8. Article
  9. Article
  10. Article
  11. Editorial.FEMS microbiology reviews · 2015
    Article
  12. Review
  13. Article
  14. Article
  15. Structure and assembly of an inner membrane platform for initiation of type IV pilus biogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ilona RoseMolecular Microbiology and Bioenergetics, Institute of Molecular Biosciences, Goethe University, Max-von-Laue-Str. 9, 60438 Frankfurt, Germany.
Goran Biuković
Patrick Aderhold
Volker Müller
Gerhard Grüber
Beate Averhoff

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thermus thermophilus is a model strain to unravel the molecular basis of horizontal gene transfer in hot environments. Previous genetic studies led to the identification of a macromolecular transport machinery mediating DNA uptake in an energy-dependent manner. Here, we have addressed how the transporter is energized. Inspection of the genome sequence revealed four putative transport (AAA) ATPases but only the deletion of one, PilF, led to a transformation defect. PilF is similar to transport ATPases of type IV and type II secretions systems but has a unique N-terminal sequence that carries a triplicated GSPII domain. To characterize PilF biochemically it was produced in Escherichia coli and purified. The recombinant protein displayed NTPase activity with a preference for ATP. Gel filtration analyses combined with dynamic light scattering demonstrated that PilF is monodispersed in solution and forms a complex of 590 ± 30 kDa, indicating a homooligomer of six subunits. It contains a tetracysteine motif, previously shown to bind Zn(2+) in related NTPases. Using atomic absorption spectroscopy, indeed Zn(2+) was detected in the enzyme, but in contrast to all known zinc-binding traffic NTPases only one zinc atom was bound to the hexamer. Deletion of the four cysteine residues led to a loss of Zn(2+). Nevertheless, the mutant protein retained ATPase activity and hexameric complex formation.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateAmino Acid SequenceChromatography, GelDNA, BacterialFimbriae ProteinsGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicMolecular Motor ProteinsMolecular Sequence DataMutationProtein Structure, TertiarySequence Homology, Amino AcidSpectrophotometry, AtomicThermus thermophilusZincAdenosine TriphosphatasesAdenosine TriphosphateDNA, BacterialFimbriae ProteinsMolecular Motor ProteinsPilF protein, PseudomonasZinc

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.