Evidence map›Paper›PMID 21209821›Full record

ArticlePloS one2010

Mammalian stem cells reprogramming in response to terahertz radiation.

Jonathan Bock, Yayoi Fukuyo, Sona Kang, M Lisa Phipps, Ludmil B Alexandrov, Kim Ø Rasmussen, Alan R Bishop, Evan D Rosen, Jennifer S Martinez, Hou-Tong Chen and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 132 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. The Transcriptomic Response of Cells of the Thermophilic BacteriumInternational journal of molecular sciences · 2024
    Article
  9. Examining DNA breathing with pyDNA-EPBD.Bioinformatics (Oxford, England) · 2023
    Article
  10. Article
  11. Article
  12. Specific Features of the Proteomic Response of Thermophilic BacteriumInternational journal of molecular sciences · 2022
    Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Cellular effects of terahertz waves.Journal of biomedical optics · 2021
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Jonathan BockDepartment of Medicine, Endocrinology, Harvard Medical School, Beth Israel Deaconess Medical Center, Boston, Massachusetts, United States of America.
Yayoi Fukuyo
Sona Kang
M Lisa Phipps
Ludmil B Alexandrov
Kim Ø Rasmussen
Alan R Bishop
Evan D Rosen
Jennifer S Martinez
Hou-Tong Chen
George Rodriguez
Boian S Alexandrov
Anny Usheva
Beth Israel Deaconess Medical Center · USLos Alamos National Laboratory · USCenter for Integrated Nanotechnologies · USHarvard University · US

Funding

YY1 FUNCTIONS IN VASCULAR SMOOTH MUSCLE CELLSR01HL062458 · NHLBI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI USHEVA-SIMIDJIYSKA, ANNY · 2000 to 2008
$2.6M
Promoter Prediction Using the Opening Profile of DNAR01GM073911 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI USHEVA-SIMIDJIYSKA, ANNY · 2005 to 2009
$1.3M
NIGMS NIH HHS 3R01GM73911-4S1NIGMS NIH HHS R01 GM073911NIGMS NIH HHS R01GM73911
6 · The paper itself

Abstract

We report that extended exposure to broad-spectrum terahertz radiation results in specific changes in cellular functions that are closely related to DNA-directed gene transcription. Our gene chip survey of gene expression shows that whereas 89% of the protein coding genes in mouse stem cells do not respond to the applied terahertz radiation, certain genes are activated, while other are repressed. RT-PCR experiments with selected gene probes corresponding to transcripts in the three groups of genes detail the gene specific effect. The response was not only gene specific but also irradiation conditions dependent. Our findings suggest that the applied terahertz irradiation accelerates cell differentiation toward adipose phenotype by activating the transcription factor peroxisome proliferator-activated receptor gamma (PPARG). Finally, our molecular dynamics computer simulations indicate that the local breathing dynamics of the PPARG promoter DNA coincides with the gene specific response to the THz radiation. We propose that THz radiation is a potential tool for cellular reprogramming.

Indexed as

Adipose TissueAnimalsCell DifferentiationComputer SimulationCytoplasmDNAGene Expression RegulationMesodermMiceOligonucleotide Array Sequence AnalysisPPAR gammaReverse Transcriptase Polymerase Chain ReactionStem CellsTerahertz RadiationDNAPPAR gamma

Identifiers

PMID21209821
PMCPMC3013123
OpenAlexW1989737064

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.