Evidence map›Paper›PMID 21209627›Full record

ArticleGene therapy2011

APOBEC3-mediated hypermutation of retroviral vectors produced from some retrovirus packaging cell lines.

A D Miller, M J Metzger

Open access · greenAbstract read
In one paragraph

Article in Gene therapy, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

A D MillerHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109-1024, USA. dmiller@fhcrc.org
M J Metzger
Seattle University · US

Funding

PILOT STUDY--RETROVIRUS MEDIATED TRANSFER OF HUMAN GLUCOCEREBROSIDASE GENEP30DK047754 · NIDDK · UNIVERSITY OF WASHINGTON · PI MILLER, ARTHUR DUSTY · 1994 to 2008
$8.4M
Northwest Genome Engineering Consortium (Component 1 of 11)UL1DE019582 · NIDCR · SEATTLE CHILDREN'S HOSPITAL · PI SCHARENBERG, ANDREW M. · 2008 to 2011
$3.1M
VIRAL ONCOLOGYT32CA009229 · NCI · UNIVERSITY OF WASHINGTON · PI LINIAL, MAXINE L · 1985 to 2007
$3.0M
NCI NIH HHS CA09229NCI NIH HHS T32 CA009229NIDCR NIH HHS UL1 DE019582NIDCR NIH HHS UL1 DE19582NIDDK NIH HHS P30 DK047754NIDDK NIH HHS P30 DK47754
6 · The paper itself

Abstract

APOBEC3 proteins are packaged into retrovirus virions and can hypermutate retroviruses during reverse transcription. We found that HT-1080 human fibrosarcoma cells hypermutate retroviruses, and that the HT-1080 cell-derived FLYA13 retrovirus packaging cells also hypermutate a retrovirus vector produced using these cells. We found no hypermutation of the same vector produced by the mouse cell-derived packaging line PT67 or by human 293 cells transfected with the vector and retrovirus packaging plasmids. We expect that avoidance of vector hypermutation will be particularly important for vectors used in gene therapy, wherein mutant proteins might stimulate deleterious immune responses.

Indexed as

Genetic VectorsMutagenesisAnimalsAPOBEC DeaminasesCell LineCell Line, TumorCytidine DeaminaseCytosine DeaminaseFibrosarcomaGene Transfer TechniquesHumansMiceRetroviridaeAPOBEC3 proteins, humanAPOBEC DeaminasesCytidine DeaminaseCytosine Deaminase

Identifiers

PMID21209627
PMCPMC3085560
OpenAlexW2068940688

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.