Evidence map›Paper›PMID 21209379›Full record

ArticleBlood2011

ATM regulates a DNA damage response posttranscriptional RNA operon in lymphocytes.

Krystyna Mazan-Mamczarz, Patrick R Hagner, Yongqing Zhang, Bojie Dai, Elin Lehrmann, Kevin G Becker, Jack D Keene, Myriam Gorospe, Zhenqui Liu, Ronald B Gartenhaus

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Ionizing Radiation and Translation Control: A Link to Radiation Hormesis?International journal of molecular sciences · 2020
    Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Roles of RNA-Binding Proteins in DNA Damage Response.International journal of molecular sciences · 2016
    Review
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Krystyna Mazan-MamczarzMarlene and Stewart Greenebaum Cancer Center, University of Maryland, Baltimore, MD, USA.
Patrick R Hagner
Yongqing Zhang
Bojie Dai
Elin Lehrmann
Kevin G Becker
Jack D Keene
Myriam Gorospe
Zhenqui Liu
Ronald B Gartenhaus
University of Maryland, Baltimore · USNational Institute on Aging · USDuke University Hospital · USNational Institutes of Health · US

Funding

UNIVERSITY OF MARYLAND GREENEBAUM CANCER CENTERSUPPORT GRANTP30CA134274 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI FEYRUZ VIRGILIA RASSOOL · 2008 to 2026
$51.0M
Post-transcriptional Regulation Of Proliferative and Stress Response GenesZIAAG000511 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM · 2009 to 2025
$25.4M
Influence of Post-transcriptional Gene Regulation on Cell Senescence and AgingZIAAG000393 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM · 2009 to 2025
$24.1M
Analysis of complex biological systems by microarray based gene expressionZICAG000616 · NIA · NATIONAL INSTITUTE ON AGING · PI DE, SUPRIYO · 2009 to 2025
$15.5M
Alcohol Consumption and Risk of NHL: Role of MTOR DysfunctionR01AA017972 · NIAAA · UNIVERSITY OF MARYLAND BALTIMORE · PI GARTENHAUS, RONALD B · 2009 to 2013
$1.7M
Intramural NIH HHSNCI NIH HHS P30 CA134274NIAAA NIH HHS R01 AA017972NIAAA NIH HHS R01AA017972
6 · The paper itself

Abstract

Maintenance of genomic stability depends on the DNA damage response, a biologic barrier in early stages of cancer development. Failure of this response results in genomic instability and high predisposition toward lymphoma, as seen in patients with ataxia-telangiectasia mutated (ATM) dysfunction. ATM activates multiple cell-cycle checkpoints and DNA repair after DNA damage, but its influence on posttranscriptional gene expression has not been examined on a global level. We show that ionizing radiation modulates the dynamic association of the RNA-binding protein HuR with target mRNAs in an ATM-dependent manner, potentially coordinating the genotoxic response as an RNA operon. Pharmacologic ATM inhibition and use of ATM-null cells revealed a critical role for ATM in this process. Numerous mRNAs encoding cancer-related proteins were differentially associated with HuR depending on the functional state of ATM, in turn affecting expression of encoded proteins. The findings presented here reveal a previously unidentified role of ATM in controlling gene expression posttranscriptionally. Dysregulation of this DNA damage response RNA operon is probably relevant to lymphoma development in ataxia-telangiectasia persons. These novel RNA regulatory modules and genetic networks provide critical insight into the function of ATM in oncogenesis.

Indexed as

DNA DamageGene Expression RegulationAntigens, SurfaceAtaxia Telangiectasia Mutated ProteinsCell Cycle ProteinsDNA-Binding ProteinsDNA RepairELAV-Like Protein 1ELAV ProteinsGene Regulatory NetworksHumansLymphocytesLymphomaMutant ProteinsOperonProtein BindingAntigens, SurfaceAtaxia Telangiectasia Mutated ProteinsATM protein, humanCell Cycle ProteinsDNA-Binding ProteinsELAVL1 protein, humanELAV-Like Protein 1ELAV ProteinsMutant ProteinsProtein Serine-Threonine KinasesRNA-Binding ProteinsRNA, MessengerTumor Suppressor Proteins

Identifiers

PMID21209379
PMCPMC3062410
OpenAlexW1968456818

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.