Evidence map›Paper›PMID 21209161›Full record

ArticleJournal of clinical microbiology2011

Rapid stool-based diagnosis of Clostridium difficile infection by real-time PCR in a children's hospital.

Ruth Ann Luna, Bobby L Boyanton, Seema Mehta, Ebony M Courtney, C Renee Webb, Paula A Revell, James Versalovic

Open access · bronzeAbstract readComparative StudyEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 76 citations in OpenAlex.

  1. Noroviruses as a Cause of Diarrhea in Immunocompromised Pediatric Hematopoietic Stem Cell and Solid Organ Transplant Recipients.American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2015
    Trial
  2. Observational
  3. Trends and Disparities inGastroenterology research and practice · 2026
    Article
  4. Observational
  5. Microorganisms · 2024
    Article
  6. Journal of medical microbiology · 2024
    Review
  7. Review
  8. Advances in diagnostic assays forFrontiers in cellular and infection microbiology · 2024
    Review
  9. Comparison of toxin gene expression levels and molecular typing ofGastroenterology and hepatology from bed to bench · 2024
    Article
  10. Review
  11. Article
  12. Article
  13. Trends and Disparities in Outcomes ofJournal of clinical medicine research · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Ruth Ann LunaDepartment of Pathology, Texas Children's Hospital, and Baylor College of Medicine, Houston, TX 77030, USA. raluna@texaschildrens.org
Bobby L Boyanton
Seema Mehta
Ebony M Courtney
C Renee Webb
Paula A Revell
James Versalovic
Texas Children's Hospital · USBaylor College of Medicine · USBeaumont Hospital, Royal Oak · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clostridium difficile is a major cause of nosocomial antibiotic-associated infectious diarrhea and pseudomembranous colitis. Detection of C. difficile by anaerobic bacterial culture and/or cytotoxicity assays has been largely replaced by rapid enzyme immunoassays (EIA). However, due to the lack of sensitivity of stool EIA, we developed a multiplex real-time PCR assay targeting the C. difficile toxin genes tcdA and tcdB. Stool samples from hospitalized pediatric patients suspected of having C. difficile-associated disease were prospectively cultured on cycloserine-cefoxitin-fructose agar following alcohol shock. Six testing modalities were evaluated, including stool EIA, culture EIA, and real-time PCR (tcdA and tcdB) of cultured isolates and stool samples. Real-time PCR detection was performed with tcdA and tcdB gene-specific primers and hydrolysis probes using the LightCycler platforms (Roche Diagnostics, Indianapolis, IN). A total of 157 samples from 96 pediatric patients were analyzed. The sensitivities of stool real-time PCR and stool EIA were 95% and 35%, respectively, with a specificity of 100% for both methods. The lower limit of detection of the stool real-time PCR was 30 CFU/ml of stool sample per reaction for tcdA and tcdB. This study highlights the poor performance of stool toxin EIAs in pediatric settings. Direct detection of C. difficile toxin genes in stool samples by real-time PCR showed sensitivity superior to that of stool and culture EIAs and performance comparable to that of real-time PCR assay of cultured isolates. Real-time PCR of DNA from stool samples is a rapid and cost-effective diagnostic modality for children that should facilitate appropriate patient management and halt the practice of serial testing by EIA.

Indexed as

AdolescentAdultBacteriological TechniquesChildChild, PreschoolClostridioides difficileClostridium InfectionsCross InfectionFecesHumansInfantInfant, NewbornPolymerase Chain ReactionProspective StudiesSensitivity and SpecificityYoung Adult

Identifiers

PMID21209161
PMCPMC3067744
OpenAlexW2162742658

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.