Evidence map›Paper›PMID 21205802›Full record

ArticleDevelopment (Cambridge, England)2011

Xenopus germline nanos1 is translationally repressed by a novel structure-based mechanism.

Xueting Luo, Steve Nerlick, Weijun An, Mary Lou King

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Maternal Dead-end 1 promotes translation ofDevelopment (Cambridge, England) · 2017
    Article
  7. Article
  8. Article
  9. Review
  10. Every which way--nanos gene regulation in echinoderms.Genesis (New York, N.Y. : 2000) · 2014
    Review
  11. Translation initiation factor eIF3h targets specific transcripts to polysomes during embryogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  12. Article
  13. Article
  14. The forkhead transcription factor FoxY regulates Nanos.Molecular reproduction and development · 2012
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Xueting LuoDepartment of Cell Biology and Anatomy, University of Miami School of Medicine, 1011 NW 15th St, Miami, FL 33136, USA.
Steve Nerlick
Weijun An
Mary Lou King
University of Miami · US

Funding

LOCALIZED RNAS--DORSAL AND GERM CELL DETERMINANTSR01GM033932 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI KING, MARY LOU · 1985 to 2010
$2.8M
Role of Translational Regulators Nanos and Dazl in Preserving TotipotencyR01GM102397 · NIGMS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI KING, MARY LOU · 2013 to 2016
$1.5M
NIGMS NIH HHS GM33932NIGMS NIH HHS R01 GM033932NIGMS NIH HHS R01 GM102397
6 · The paper itself

Abstract

The translational repressor Nanos is expressed in the germline and stem cell populations of jellyfish as well as humans. Surprisingly, we observed that unlike other mRNAs, synthetic nanos1 RNA translates very poorly if at all after injection into Xenopus oocytes. The current model of simple sequestration of nanos1 within germinal granules is insufficient to explain this observation and suggests that a second level of repression must be operating. We find that an RNA secondary structural element immediately downstream of the AUG start site is both necessary and sufficient to prevent ribosome scanning in the absence of a repressor. Accordingly, repression is relieved by small in-frame insertions before this secondary structure, or translational control element (TCE), that provide the 15 nucleotides required for ribosome entry. nanos1 is translated shortly after fertilization, pointing to the existence of a developmentally regulated activator. Oocyte extracts were rendered fully competent for nanos1 translation after the addition of a small amount of embryo extract, confirming the presence of an activator. Misexpression of Nanos1 in oocytes from unlocalized RNA results in abnormal development, highlighting the importance of TCE-mediated translational repression. Although found in prokaryotes, steric hindrance as a mechanism for negatively regulating translation is novel for a eukaryotic RNA. These observations unravel a new mode of nanos1 regulation at the post-transcriptional level that is essential for normal development.

Indexed as

AnimalsBlotting, WesternFluorescent Antibody TechniqueGene Expression Regulation, DevelopmentalImmunoprecipitationMicroscopy, ConfocalProtein BiosynthesisRNA, MessengerStructure-Activity RelationshipXenopusXenopus ProteinsRNA, MessengerXenopus Proteins

Identifiers

PMID21205802
PMCPMC3014641
OpenAlexW1964891068

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.