Evidence map›Paper›PMID 21205365›Full record

ArticleNeuron glia biology2010

Monitoring astrocyte calcium microdomains with improved membrane targeted GCaMP reporters.

Eiji Shigetomi, Sebastian Kracun, Baljit S Khakh

Abstract read
In one paragraph

Article in Neuron glia biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Cell adhesion and intracellular calcium signaling in neurons.Cell communication and signaling : CCS · 2013
    Pooled it
  2. Article
  3. Article
  4. Article
  5. The Astroglia Syncytial Theory of Consciousness.International journal of molecular sciences · 2025
    Review
  6. Article
  7. Article
  8. CaProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. Photoswitching alters fluorescence readout of jGCaMP8 CaProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Potential and Realized Impact of Astroglia CaFrontiers in cellular neuroscience · 2021
    Review
  18. Article
  19. Article
  20. A centrosome-localized calcium signal is essential for mammalian cell mitosis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Eiji ShigetomiDepartment of Physiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, USA.
Sebastian Kracun
Baljit S Khakh

Funding

Functions of astrocyte calcium signaling in the striatumR01NS060677 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KHAKH, BALJIT · 2008 to 2018
$4.3M
Tracking transmitter gated P2X cation channel activation in vitro and in vivo.R21NS063186 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KHAKH, BALJIT · 2008 to 2009
$382k
An approach to image calcium in small volumes of astrocytes in vivoR21NS071292 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KHAKH, BALJIT, SOFRONIEW, MICHAEL V · 2010 to 2011
$381k
NINDS NIH HHS NS060677NINDS NIH HHS NS063186NINDS NIH HHS NS071292NINDS NIH HHS R01 NS060677NINDS NIH HHS R21 NS063186NINDS NIH HHS R21 NS071292
6 · The paper itself

Abstract

Astrocytes are involved in synaptic and cerebrovascular regulation in the brain. These functions are regulated by intracellular calcium signalling that is thought to reflect a form of astrocyte excitability. In a recent study, we reported modification of the genetically encoded calcium indicator (GECI) GCaMP2 with a membrane-tethering domain, Lck, to generate Lck-GCaMP2. This GECI allowed us to detect novel microdomain calcium signals. The microdomains were random and 'spotty' in nature. In order to detect such signals more reliably, in the present study we further modified Lck-GCaMP2 to carry three mutations in the GCaMP2 moiety (M153K, T203V within EGFP and N60D in the CaM domain) to generate Lck-GCaMP3. We directly compared Lck-GCaMP2 and Lck-GCaMP3 by assessing their ability to monitor several types of astrocyte calcium signals with a focus on spotty microdomains. Our data show that Lck-GCaMP3 is between two- and four-times better than Lck-GCaMP2 in terms of its basal fluorescence intensity, signal-to-noise and its ability to detect microdomains. The use of Lck-GCaMP3 thus represents a significantly improved way to monitor astrocyte calcium signals, including microdomains, and will facilitate detailed exploration of their molecular mechanisms and physiological roles.

Indexed as

Genes, ReporterMembrane MicrodomainsAnimalsAstrocytesCalcium SignalingHEK293 CellsHumansNeurophysiologyRats

Identifiers

PMID21205365
PMCPMC3136572

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.