Evidence map›Paper›PMID 21203527›Full record

ArticlePloS one2010

Genome-wide analysis reveals loci encoding anti-macrophage factors in the human pathogen Burkholderia pseudomallei K96243.

Andrea J Dowling, Paul A Wilkinson, Matthew T G Holden, Michael A Quail, Stephen D Bentley, Julia Reger, Nicholas R Waterfield, Richard W Titball, Richard H Ffrench-Constant

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. An Evolutionary Arms Race BetweenFrontiers in microbiology · 2020
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Melioidosis: molecular aspects of pathogenesis.Expert review of anti-infective therapy · 2014
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Andrea J DowlingBiosciences, University of Exeter, Penryn, United Kingdom. ajd211@exeter.ac.uk
Paul A Wilkinson
Matthew T G Holden
Michael A Quail
Stephen D Bentley
Julia Reger
Nicholas R Waterfield
Richard W Titball
Richard H Ffrench-Constant
University of Exeter · GBWellcome Sanger Institute · GBUniversity of Bath · GB

Funding

Biotechnology and Biological Sciences Research Council BB/E021182/1Biotechnology and Biological Sciences Research Council BB/E021328/1Wellcome Trust
6 · The paper itself

Abstract

Burkholderia pseudomallei is an important human pathogen whose infection biology is still poorly understood. The bacterium is endemic to tropical regions, including South East Asia and Northern Australia, where it causes melioidosis, a serious disease associated with both high mortality and antibiotic resistance. B. pseudomallei is a Gram-negative facultative intracellular pathogen that is able to replicate in macrophages. However despite the critical nature of its interaction with macrophages, few anti-macrophage factors have been characterized to date. Here we perform a genome-wide gain of function screen of B. pseudomallei strain K96243 to identify loci encoding factors with anti-macrophage activity. We identify a total of 113 such loci scattered across both chromosomes, with positive gene clusters encoding transporters and secretion systems, enzymes/toxins, secondary metabolite, biofilm, adhesion and signal response related factors. Further phenotypic analysis of four of these regions shows that the encoded factors cause striking cellular phenotypes relevant to infection biology, including apoptosis, formation of actin 'tails' and multi-nucleation within treated macrophages. The detailed analysis of the remaining host of loci will facilitate genetic dissection of the interaction of this important pathogen with host macrophages and thus further elucidate this critical part of its infection cycle.

Indexed as

Genome-Wide Association StudyAnimalsBurkholderia pseudomalleiChromosome MappingChromosomesChromosomes, Artificial, BacterialGene LibraryGenome, BacterialHumansMacrophagesMiceModels, GeneticMultigene FamilyPhenotypeVirulence FactorsVirulence Factors

Identifiers

PMID21203527
PMCPMC3008741
OpenAlexW1980781181

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.