Evidence map›Paper›PMID 21203494›Full record

ArticlePLoS genetics2010

A young Drosophila duplicate gene plays essential roles in spermatogenesis by regulating several Y-linked male fertility genes.

Yun Ding, Li Zhao, Shuang Yang, Yu Jiang, Yuan Chen, Ruoping Zhao, Yue Zhang, Guojie Zhang, Yang Dong, Haijing Yu and 2 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
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  5. An orphan gene is essential for efficient sperm entry into eggs inbioRxiv : the preprint server for biology · 2024
    Article
  6. Human-specific epigenomic states in spermatogenesis.Computational and structural biotechnology journal · 2024
    Article
  7. De Novo Genes.Annual review of genetics · 2024
    Review
  8. Journal of fungi (Basel, Switzerland) · 2024
    Article
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  10. Review
  11. HP6/Umbrea is dispensable for viability and fertility, suggesting essentiality of newly evolved genes is rare.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Yun DingState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China.
Li Zhao
Shuang Yang
Yu Jiang
Yuan Chen
Ruoping Zhao
Yue Zhang
Guojie Zhang
Yang Dong
Haijing Yu
Qi Zhou
Wen Wang
Chinese Academy of Sciences · CNUniversity of Chinese Academy of Sciences · CNKunming Institute of Zoology · CNYunnan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene duplication is supposed to be the major source for genetic innovations. However, how a new duplicate gene acquires functions by integrating into a pathway and results in adaptively important phenotypes has remained largely unknown. Here, we investigated the biological roles and the underlying molecular mechanism of the young kep1 gene family in the Drosophila melanogaster species subgroup to understand the origin and evolution of new genes with new functions. Sequence and expression analysis demonstrates that one of the new duplicates, nsr (novel spermatogenesis regulator), exhibits positive selection signals and novel subcellular localization pattern. Targeted mutagenesis and whole-transcriptome sequencing analysis provide evidence that nsr is required for male reproduction associated with sperm individualization, coiling, and structural integrity of the sperm axoneme via regulation of several Y chromosome fertility genes post-transcriptionally. The absence of nsr-like expression pattern and the presence of the corresponding cis-regulatory elements of the parental gene kep1 in the pre-duplication species Drosophila yakuba indicate that kep1 might not be ancestrally required for male functions and that nsr possibly has experienced the neofunctionalization process, facilitated by changes of trans-regulatory repertories. These findings not only present a comprehensive picture about the evolution of a new duplicate gene but also show that recently originated duplicate genes can acquire multiple biological roles and establish novel functional pathways by regulating essential genes.

Indexed as

Gene DuplicationGene Expression Regulation, DevelopmentalSpermatogenesisAmino Acid SequenceAnimalsDrosophilaDrosophila ProteinsEvolution, MolecularFemaleFertilityMaleMolecular Sequence DataPhylogenySequence AlignmentSpecies SpecificitySpermatozoaDrosophila Proteins

Identifiers

PMID21203494
PMCPMC3009665
OpenAlexW2037841495

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.