Evidence map›Paper›PMID 21195549›Full record

ArticlePain2011

Genomic loci and candidate genes underlying inflammatory nociception.

Harsha K Nair, Heather Hain, Raymond M Quock, Vivek M Philip, Elissa J Chesler, John K Belknap, William R Lariviere

Abstract read
In one paragraph

Article in Pain, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Precise genetic mapping and integrative bioinformatics in Diversity Outbred mice reveals Hydin as a novel pain gene.Mammalian genome : official journal of the International Mammalian Genome Society · 2014
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Harsha K NairUniversity of Pittsburgh, School of Medicine, Pittsburgh, PA, USA VA Medical Center and Oregon Health & Science University, Portland, OR, USA Washington State University, Pullman, WA, USA The Jackson Laboratory, Bar Harbor, ME, USA.
Heather Hain
Raymond M Quock
Vivek M Philip
Elissa J Chesler
John K Belknap
William R Lariviere
Jackson Laboratory · USUniversity of Pittsburgh · USPortland VA Medical Center · USUniversity of Portland · USWashington State University · US

Funding

GENETICS OF NEUROPATHIC & INFLAMMATORY HYPERSENSITIVITYR01DA021198 · NIDA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LARIVIERE, WILLIAM ROGER · 2007 to 2011
$1.7M
NITROUS OXIDE AND ENDORPHINSR01DE006894 · NIDCR · UNIVERSITY OF ILLINOIS AT CHICAGO · PI QUOCK, RAYMOND MARK · 1985 to 1993
–
BIOMEDICAL RESEARCH SUPPORTS07RR005369 · NCRR · UNIVERSITY OF ILLINOIS AT CHICAGO · PI BOSMAN, H BRUCE · 1985 to 1991
–
NCRR NIH HHS BRSG S07RR 05369NIDA NIH HHS 1R01DA021198NIDA NIH HHS R01 DA021198NIDCR NIH HHS DE-06894
6 · The paper itself

Abstract

Heritable genetic factors contribute significantly to inflammatory nociception. To determine candidate genes underlying inflammatory nociception, the current study used a mouse model of abdominal inflammatory pain. BXD recombinant inbred (RI) mouse strains were administered the intraperitoneal acetic acid test, and genome-wide quantitative trait locus (QTL) mapping was performed on the mean number of abdominal contraction and extension movements in 3 distinct groups of BXD RI mouse strains in 2 separate experiments. Combined mapping results detected 2 QTLs on chromosomes (Chr) 3 and 10 across experiments and groups of mice; an additional sex-specific QTL was detected on Chr 16. The results replicate previous findings of a significant QTL, Nociq2, on distal Chr 10 for formalin-induced inflammatory nociception and will aid in identification of the underlying candidate genes. Comparisons of sensitivity to intraperitoneal acetic acid in BXD RI mouse strains with microarray mRNA transcript expression profiles in specific brain areas detected covarying expression of candidate genes that are also found in the detected QTL confidence intervals. The results indicate that common and distinct genetic mechanisms underlie heritable sensitivity to diverse inflammatory insults, and provide a discrete set of high-priority candidate genes to investigate further in rodents and human association studies. Novel genomic regions linked to inflammatory nociception were detected, a previously reported locus was confirmed, and high-priority candidate genes for inflammatory nociception and pain were identified.

Indexed as

Acetic AcidAnimalsChromosome MappingConfidence IntervalsDatabases, GeneticFemaleGenomeHumansInflammationMaleMiceMice, Inbred C57BLMice, Inbred DBAPainPain PerceptionQuantitative Trait LociAcetic Acid

Identifiers

PMID21195549
PMCPMC3039031
OpenAlexW2036920764

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.