Evidence map›Paper›PMID 21193672›Full record

ArticleApplied and environmental microbiology2011

Specific real-time PCR for simultaneous detection and identification of Legionella pneumophila serogroup 1 in water and clinical samples.

N Mérault, C Rusniok, S Jarraud, L Gomez-Valero, C Cazalet, M Marin, E Brachet, P Aegerter, J L Gaillard, J Etienne and 4 more

Abstract readEvaluation Study
In one paragraph

Article in Applied and environmental microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 111 citations in OpenAlex.

  1. Pooled it
  2. Evaluation ofMicrobiology spectrum · 2026
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  4. Antimicrobial Resistance Genes inAntibiotics (Basel, Switzerland) · 2024
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  6. Article
  7. A rapid and reliable method for earlyFrontiers in microbiology · 2024
    Article
  8. Article
  9. Article
  10. Presence of Viable, Clinically RelevantMicrobiology spectrum · 2022
    Article
  11. Legionnaires' Disease: Update on Diagnosis and Treatment.Infectious diseases and therapy · 2022
    Review
  12. Non-IDCases · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Legionnaires' Disease Cases at a Large Community Hospital-Common and Underdiagnosed.International journal of environmental research and public health · 2020
    Article
  19. The Impact of Storms onFrontiers in microbiology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

N MéraultInstitut Pasteur, Biologie des Bactéries Intracellulaires, 28, rue du Dr. Roux, 75724 Paris, France.
C Rusniok
S Jarraud
L Gomez-Valero
C Cazalet
M Marin
E Brachet
P Aegerter
J L Gaillard
J Etienne
J L Herrmann
DELPH-I Study Group
C Lawrence
C Buchrieser
Centre National de la Recherche Scientifique · FRInstitut Pasteur · FRHôpital Ambroise-Paré · FRHospices Civils de Lyon · FRInserm · FR

Funding

NCI NIH HHS CA-01234Wellcome Trust
6 · The paper itself

Abstract

Legionella pneumophila, a bacterium that replicates within aquatic amoebae and persists in the environment as a free-living microbe, is the causative agent of Legionnaires' disease. Among the many Legionella species described, L. pneumophila is associated with 90% of human disease, and within the 15 serogroups (Sg), L. pneumophila Sg1 causes more than 84% of Legionnaires' disease worldwide. Thus, rapid and specific identification of L. pneumophila Sg1 is of the utmost importance for evaluation of the contamination of collective water systems and the risk posed. Previously we had shown that about 20 kb of the 33-kb locus carrying the genes coding for the proteins involved in lipopolysaccharide biosynthesis (LPS gene cluster) by L. pneumophila was highly specific for Sg1 strains and that three genes (lpp0831, wzm, and wzt) may serve as genetic markers. Here we report the sequencing and comparative analyses of this specific region of the LPS gene cluster in L. pneumophila Sg6, -10, -12, -13, and -14. Indeed, the wzm and wzt genes were present only in the Sg1 LPS gene cluster, which showed a very specific gene content with respect to the other five serogroups investigated. Based on this observation, we designed primers and developed a classical and a real-time PCR method for the detection and simultaneous identification of L. pneumophila Sg1 in clinical and environmental isolates. Evaluation of the selected primers with 454 Legionella and 38 non-Legionella strains demonstrated 100% specificity. Sensitivity, specificity, and predictive values were further evaluated with 209 DNA extracts from water samples of hospital water supply systems and with 96 respiratory specimens. The results showed that the newly developed quantitative Sg1-specific PCR method is a highly specific and efficient tool for the surveillance and rapid detection of high-risk L. pneumophila Sg1 in water and clinical samples.

Indexed as

Water MicrobiologyBacteriological TechniquesBiosynthetic PathwaysDNA, BacterialDNA PrimersGenes, BacterialHumansLegionella pneumophilaLegionellosisLipopolysaccharidesMolecular Sequence DataMultigene FamilyPolymerase Chain ReactionSensitivity and SpecificitySequence Analysis, DNADNA, BacterialDNA PrimersLipopolysaccharides

Identifiers

PMID21193672
PMCPMC3067292
OpenAlexW2165508450

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.