Evidence map›Paper›PMID 21191641›Full record

ArticleJournal of computational neuroscience2011

A computer model of unitary responses from associational/commissural and perforant path synapses in hippocampal CA3 pyramidal cells.

John L Baker, Tamara Perez-Rosello, Michele Migliore, Germán Barrionuevo, Giorgio A Ascoli

Erratum issuedAbstract read
In one paragraph

Article in Journal of computational neuroscience, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

John L BakerCenter for Neural Informatics, Structures, & Plasticity, George Mason University, 4400 University Drive, MS 2A1, Fairfax, VA 22030, USA.
Tamara Perez-Rosello
Michele Migliore
Germán Barrionuevo
Giorgio A Ascoli
George Mason University · USUniversity of Pittsburgh · US

Funding

Generation and Description of Neuronal Morphology and ConnectivityR01NS039600 · NINDS · GEORGE MASON UNIVERSITY · PI ASCOLI, GIORGIO A · 1999 to 2024
$6.9M
CRCNS: Input/Output Relationship in CA3 Pyramidal CellsR01AG025633 · NIA · GEORGE MASON UNIVERSITY · PI ASCOLI, GIORGIO A · 2004 to 2008
$1.5M
Neuroinformatics of the Hippocampus: From System-Level to Neuronal ArborizationsR21NS058816 · NINDS · GEORGE MASON UNIVERSITY · PI ASCOLI, GIORGIO A · 2008 to 2009
$329k
NIA NIH HHS AG025633NIA NIH HHS R01 AG025633NINDS NIH HHS NS39600NINDS NIH HHS R01 NS039600NINDS NIH HHS R21 NS058816
6 · The paper itself

Abstract

Despite the central position of CA3 pyramidal cells in the hippocampal circuit, the experimental investigation of their synaptic properties has been limited. Recent slice experiments from adult rats characterized AMPA and NMDA receptor unitary synaptic responses in CA3b pyramidal cells. Here, excitatory synaptic activation is modeled to infer biophysical parameters, aid analysis interpretation, explore mechanisms, and formulate predictions by contrasting simulated somatic recordings with experimental data. Reconstructed CA3b pyramidal cells from the public repository NeuroMorpho.Org were used to allow for cell-specific morphological variation. For each cell, synaptic responses were simulated for perforant pathway and associational/commissural synapses. Means and variability for peak amplitude, time-to-peak, and half-height width in these responses were compared with equivalent statistics from experimental recordings. Synaptic responses mediated by AMPA receptors are best fit with properties typical of previously characterized glutamatergic receptors where perforant path synapses have conductances twice that of associational/commissural synapses (0.9 vs. 0.5 nS) and more rapid peak times (1.0 vs. 3.3 ms). Reanalysis of passive-cell experimental traces using the model shows no evidence of a CA1-like increase of associational/commissural AMPA receptor conductance with increasing distance from the soma. Synaptic responses mediated by NMDA receptors are best fit with rapid kinetics, suggestive of NR2A subunits as expected in mature animals. Predictions were made for passive-cell current clamp recordings, combined AMPA and NMDA receptor responses, and local dendritic depolarization in response to unitary stimulations. Models of synaptic responses in active cells suggest altered axial resistivity and the presence of synaptically activated potassium channels in spines.

Indexed as

AnimalsCA3 Region, HippocampalComputer SimulationModels, NeurologicalPyramidal CellsRatsReceptors, AMPAReceptors, N-Methyl-D-AspartateSynapsesReceptors, AMPAReceptors, N-Methyl-D-Aspartate

Identifiers

PMID21191641
PMCPMC4164295
OpenAlexW2091086088

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.