Evidence map›Paper›PMID 21190652›Full record

ArticleBiophysical journal2011

A model of the interaction between N-type and C-type inactivation in Kv1.4 channels.

Glenna C L Bett, Isidore Dinga-Madou, Qinlian Zhou, Vladimir E Bondarenko, Randall L Rasmusson

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Activity-dependent modulation of neuronal KThe Journal of biological chemistry · 2022
    Article
  4. Article
  5. Modeling the kinetics of heteromeric potassium channels.Frontiers in cellular neuroscience · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Models of HERG gating.Biophysical journal · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Glenna C L BettDepartment of Gynecology-Obstetrics, The State University of New York, University at Buffalo, Buffalo, New York, USA.
Isidore Dinga-Madou
Qinlian Zhou
Vladimir E Bondarenko
Randall L Rasmusson
University at Buffalo, State University of New York · USNew York University · US

Funding

Markov Models of Potassium Channel GatingR01HL062465 · NHLBI · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI RASMUSSON, RANDALL L. · 1998 to 2012
$3.5M
NHLBI NIH HHS 5R01HL062465NHLBI NIH HHS 5R01HL062465-S1NHLBI NIH HHS R01 HL062465
6 · The paper itself

Abstract

Kv1.4 channels are Shaker-related voltage-gated potassium channels with two distinct inactivation mechanisms. Fast N-type inactivation operates by a ball-and-chain mechanism. Slower C-type inactivation is not so well defined, but involves intracellular and extracellular conformational changes of the channel. We studied the interaction between inactivation mechanisms using two-electrode voltage-clamp of Kv1.4 and Kv1.4ΔN (amino acids 2-146 deleted to remove N-type inactivation) heterologously expressed in Xenopus oocytes. We manipulated C-type inactivation by introducing a lysine-tyrosine point mutation (K532Y, equivalent to Shaker T449Y) that diminishes C-type inactivation. We used experimental data to develop a comprehensive computer model of Kv1.4 channels to determine the interaction between activation and N- and C-type inactivation mechanisms needed to replicate the experimental data. C-type inactivation began at lower voltage preactivated states, whereas N-type inactivation was coupled directly to the open state. A model with distinct N- and C-type inactivated states was not able to reproduce experimental data, and direct transitions between N- and C-type inactivated states were required, i.e., there is coupling between N- and C-type inactivated states. C-type inactivation is the rate-limiting step determining recovery from inactivation, so understanding C-type inactivation, and how it is coupled to N-type inactivation, is critical in understanding how channels act to repetitive stimulation.

Indexed as

Ion Channel GatingModels, BiologicalAnimalsFerretsKineticsKv1.4 Potassium ChannelXenopus laevisKv1.4 Potassium Channel

Identifiers

PMID21190652
PMCPMC3010008
OpenAlexW1966943380

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.