Evidence map›Paper›PMID 21189684›Full record

ReviewAdvances in experimental medicine and biology2010

Insights into the structural basis of RNA recognition by STAR domain proteins.

Sean P Ryder, Francesca Massi

Abstract readReview
In one paragraph

Review in Advances in experimental medicine and biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Biology · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sean P RyderDepartment of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, 364 Plantation Street, LRB-906, Worcester, Massachusetts 01605, USA. sean.ryder@umassmed.edu
Francesca Massi
University of Massachusetts Chan Medical School · US

Funding

RNA recognition by maternal gene silencers in nematodesR01GM081422 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI RYDER, SEAN PATRICK · 2008 to 2012
$1.7M
Small molecule effectors of maternal gene expression in C. elegans embryogenesisR21NS059380 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI RYDER, SEAN PATRICK · 2007 to 2008
$232k
NIGMS NIH HHS R01 GM081422NINDS NIH HHS R21 NS059380
6 · The paper itself

Abstract

STAR proteins regulate diverse cellular processes and control numerous developmental events. They function at the post-transcriptional level by regulating the stability, sub-cellular distribution, alternative splicing, or translational efficiency of specific mRNA targets. Significant effort has been expended to define the determinants of RNA recognition by STAR proteins, in hopes of identifying new mRNA targets that contribute their role in cellular metabolism and development. This work has lead to the extensive biochemical characterization ofthe nucleotide sequence specificity of a handful of STAR proteins. In contrast, little structural information is available to analyze the molecular basis of sequence specific RNA recognition by this protein family. This chapter reviews the relevant literature on STAR domain protein structure and provides insights into how these proteins discriminate between different RNA sequences.

Indexed as

AnimalsHumansProtein Structure, TertiaryRNARNA-Binding ProteinsRNARNA-Binding Proteins

Identifiers

PMID21189684
PMCPMC5034770
OpenAlexW38649504

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.