Evidence map›Paper›PMID 21189342›Full record

ArticleAntimicrobial agents and chemotherapy2011

Genotypic resistance in Helicobacter pylori strains correlates with susceptibility test and treatment outcomes after levofloxacin- and clarithromycin-based therapies.

Jyh-Ming Liou, Chi-Yang Chang, Wang-Huei Sheng, Yu-Chi Wang, Mei-Jyh Chen, Yi-Chia Lee, Hsu-Wei Hung, Hung Chian, San-Chun Chang, Ming-Shiang Wu and 1 more

Abstract read
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Article in Antimicrobial agents and chemotherapy, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 69 citations in OpenAlex.

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  5. Third-Line and Later Susceptibility-GuidedJournal of clinical medicine · 2026
    Article
  6. Epidemiological characteristics of Helicobacter pylori infection and antibiotic resistance in urban areas of Guangdong Province, China: a multi-center, cross-sectional surveillance.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Article
  7. Article
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  9. Mutations Related to Antibiotics Resistance inAntibiotics (Basel, Switzerland) · 2023
    Article
  10. Personalized Approach in Eradication ofAntibiotics (Basel, Switzerland) · 2022
    Review
  11. Article
  12. Treatment of RefractoryGut and liver · 2022
    Review
  13. Article
  14. Article
  15. Article
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  19. Update on quinolone-containing rescue therapies forWorld journal of gastroenterology · 2020
    Review
  20. Characteristics ofAntimicrobial resistance and infection control · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Jyh-Ming LiouDepartmentsof Internal Medicine, National Taiwan University Hospital, National Taiwan University, College of Medicine, Taipei, Taiwan.
Chi-Yang Chang
Wang-Huei Sheng
Yu-Chi Wang
Mei-Jyh Chen
Yi-Chia Lee
Hsu-Wei Hung
Hung Chian
San-Chun Chang
Ming-Shiang Wu
Jaw-Town Lin
National Taiwan University Hospital · TWE-Da Hospital · TWTaipei Institute of Pathology · TWI-Shou University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The accuracy of genotypic resistance to levofloxacin (gyrA mutations) and its agreement with treatment outcomes after levofloxacin-based therapy have not been reported. We aimed to assess the correlation. Helicobacter pylori strains isolated from patients who received levofloxacin-based and clarithromycin-based triple therapies in a previous randomized trial were analyzed for point mutations in gyrA and 23S rRNA. PCR followed by direct sequencing was used to assess the gyrA and 23S rRNA mutations. An agar dilution test was used to determine the MICs of clarithromycin and levofloxacin. We found that the agreement between genotypic and phenotypic resistance to levofloxacin was best when the MIC breakpoint was >1 μg/ml (kappa coefficient, 0.754). The eradication rates in patients with and without gyrA mutations were 41.7% and 82.7%, respectively (P = 0.003). The agreement between genotypic and phenotypic resistance to clarithromycin was best when the MIC breakpoint was >2 μg/ml (kappa, 0.694). The eradication rates in patients with and without 23S rRNA mutations were 7.7% and 93.5%, respectively (P < 0.001). The agreements (kappa coefficient) between therapeutic outcomes after clarithromycin-based triple therapy and genotypic and phenotypic resistance were 0.671 and 0.356, respectively. The agreements (kappa coefficient) between therapeutic outcomes after levofloxacin-based triple therapy and genotypic and phenotypic resistance were 0.244 and 0.190, respectively. In conclusion, gyrA and 23S rRNA mutations in H. pylori strains appeared to be better markers than phenotypic resistance in the prediction of treatment outcomes. The optimal breakpoints for levofloxacin and clarithromycin resistance appeared to be >1 μg/ml and >2 μg/ml, respectively.

Indexed as

LevofloxacinAdultClarithromycinDNA GyraseDrug Resistance, Multiple, BacterialFemaleGenotypeHelicobacter InfectionsHelicobacter pyloriHumansMaleMicrobial Sensitivity TestsMiddle AgedOfloxacinRandomized Controlled Trials as TopicRNA, Ribosomal, 23SClarithromycinDNA GyraseLevofloxacinOfloxacinRNA, Ribosomal, 23S

Identifiers

PMID21189342
PMCPMC3067120
OpenAlexW2145670671

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.