Evidence map›Paper›PMID 21189287›Full record

ArticleMolecular and cellular biology2011

TIA1 prevents skipping of a critical exon associated with spinal muscular atrophy.

Natalia N Singh, Joonbae Seo, Eric W Ottesen, Maria Shishimorova, Dhruva Bhattacharya, Ravindra N Singh

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 81 citations in OpenAlex.

  1. Trial
  2. Review
  3. Observational
  4. Pre-mRNA Splicing Modulation by Antisense Oligonucleotides.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. T-Cell Intracellular Antigen 1-Like Protein in Physiology and Pathology.International journal of molecular sciences · 2022
    Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Spinal muscular atrophy: Broad disease spectrum and sex-specific phenotypes.Biochimica et biophysica acta. Molecular basis of disease · 2021
    Review
  18. Review
  19. Article
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Natalia N SinghDepartment of Biomedical Sciences, College of Veterinary Medicine, 2034 Veterinary Medicine Bldg., Iowa State University, Ames, IA 50011, USA. singhr@iastate.edu
Joonbae Seo
Eric W Ottesen
Maria Shishimorova
Dhruva Bhattacharya
Ravindra N Singh
Iowa State University · US

Funding

Splicing Regulation of Spinal Muscular Atrophy GenesR01NS055925 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI SINGH, RAVINDRA N · 2006 to 2023
$5.6M
NINDS NIH HHS R01 NS055925NINDS NIH HHS R01NS055925
6 · The paper itself

Abstract

Prevention of skipping of exon 7 during pre-mRNA splicing of Survival Motor Neuron 2 (SMN2) holds the promise for cure of spinal muscular atrophy (SMA), a leading genetic cause of infant mortality. Here, we report T-cell-restricted intracellular antigen 1 (TIA1) and TIA1-related (TIAR) proteins as intron-associated positive regulators of SMN2 exon 7 splicing. We show that TIA1/TIAR stimulate exon recognition in an entirely novel context in which intronic U-rich motifs are separated from the 5' splice site by overlapping inhibitory elements. TIA1 and TIAR are modular proteins with three N-terminal RNA recognition motifs (RRMs) and a C-terminal glutamine-rich (Q-rich) domain. Our results reveal that any one RRM in combination with a Q domain is necessary and sufficient for TIA1-associated regulation of SMN2 exon 7 splicing in vivo. We also show that increased expression of TIA1 counteracts the inhibitory effect of polypyrimidine tract binding protein, a ubiquitously expressed factor recently implicated in regulation of SMN exon 7 splicing. Our findings expand the scope of TIA1/TIAR in genome-wide regulation of alternative splicing under normal and pathological conditions.

Indexed as

Alternative SplicingExonsCell LineHumansIntronsMuscular Atrophy, SpinalPoly(A)-Binding ProteinsPolypyrimidine Tract-Binding ProteinRNA-Binding ProteinsSurvival of Motor Neuron 2 ProteinT-Cell Intracellular Antigen-1Poly(A)-Binding ProteinsPolypyrimidine Tract-Binding ProteinRNA-Binding ProteinsSMN2 protein, humanSurvival of Motor Neuron 2 ProteinT-Cell Intracellular Antigen-1TIA1 protein, humanTIAL1 protein, human

Identifiers

PMID21189287
PMCPMC3067828
OpenAlexW2108665093

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.