Evidence map›Paper›PMID 21187920›Full record

ArticlePloS one2010

Viral epidemics in a cell culture: novel high resolution data and their interpretation by a percolation theory based model.

Balázs Gönci, Valéria Németh, Emeric Balogh, Bálint Szabó, Ádám Dénes, Zsuzsanna Környei, Tamás Vicsek

Abstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Balázs GönciDepartment of Biological Physics, Eötvös University, Budapest, Hungary.
Valéria Németh
Emeric Balogh
Bálint Szabó
Ádám Dénes
Zsuzsanna Környei
Tamás Vicsek

Funding

European Research Council 227878
6 · The paper itself

Abstract

Because of its relevance to everyday life, the spreading of viral infections has been of central interest in a variety of scientific communities involved in fighting, preventing and theoretically interpreting epidemic processes. Recent large scale observations have resulted in major discoveries concerning the overall features of the spreading process in systems with highly mobile susceptible units, but virtually no data are available about observations of infection spreading for a very large number of immobile units. Here we present the first detailed quantitative documentation of percolation-type viral epidemics in a highly reproducible in vitro system consisting of tens of thousands of virtually motionless cells. We use a confluent astroglial monolayer in a Petri dish and induce productive infection in a limited number of cells with a genetically modified herpesvirus strain. This approach allows extreme high resolution tracking of the spatio-temporal development of the epidemic. We show that a simple model is capable of reproducing the basic features of our observations, i.e., the observed behaviour is likely to be applicable to many different kinds of systems. Statistical physics inspired approaches to our data, such as fractal dimension of the infected clusters as well as their size distribution, seem to fit into a percolation theory based interpretation. We suggest that our observations may be used to model epidemics in more complex systems, which are difficult to study in isolation.

Indexed as

AnimalsAstrocytesCells, CulturedComputer SimulationCulture MediaEpidemicsFractalsGreen Fluorescent ProteinsHerpesvirus 1, SuidImmunohistochemistryKineticsMiceModels, StatisticalNormal DistributionSoftwareVirus DiseasesCulture MediaGreen Fluorescent Proteins

Identifiers

PMID21187920
PMCPMC3004943

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.