Evidence map›Paper›PMID 21187377›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Vibrio cholerae anaerobic induction of virulence gene expression is controlled by thiol-based switches of virulence regulator AphB.

Zhi Liu, Menghua Yang, Gregory L Peterfreund, Amy M Tsou, Nur Selamoglu, Fevzi Daldal, Zengtao Zhong, Biao Kan, Jun Zhu

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 113 citations in OpenAlex.

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  9. Structural Insights into Regulation of Vibrio Virulence Gene Networks.Advances in experimental medicine and biology · 2023
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  19. On or Off: Life-Changing Decisions Made byInfectious microbes & diseases · 2020
    Review
  20. Review

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Zhi LiuDepartment of Microbiology, School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Menghua Yang
Gregory L Peterfreund
Amy M Tsou
Nur Selamoglu
Fevzi Daldal
Zengtao Zhong
Biao Kan
Jun Zhu
University of Pennsylvania · USNanjing Agricultural University · CNNational Institute for Communicable Disease Control and Prevention · CN

Funding

Respiratory Complex III: Supercomplexes and ROS, from Bacteria to HumanR01GM038237 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI DALDAL, M. FEVZI · 1987 to 2018
$5.9M
Training in Emerging Infectious DiseasesT32AI055400 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI CHERRY, SARA, HENSLEY, SCOTT ERIC · 2003 to 2022
$4.4M
Analysis of gene regulation of Vibrio cholerae infectionR01AI072479 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI ZHU, JUN · 2007 to 2011
$2.1M
NIAID NIH HHS R01 AI072479NIAID NIH HHS R01AI072479NIAID NIH HHS T32 AI055400NIGMS NIH HHS GM-38237NIGMS NIH HHS R01 GM038237
6 · The paper itself

Abstract

Bacterial pathogens have evolved sophisticated signal transduction systems to coordinately control the expression of virulence determinants. For example, the human pathogen Vibrio cholerae is able to respond to host environmental signals by activating transcriptional regulatory cascades. The host signals that stimulate V. cholerae virulence gene expression, however, are still poorly understood. Previous proteomic studies indicated that the ambient oxygen concentration plays a role in V. cholerae virulence gene expression. In this study, we found that under oxygen-limiting conditions, an environment similar to the intestines, V. cholerae virulence genes are highly expressed. We show that anaerobiosis enhances dimerization and activity of AphB, a transcriptional activator that is required for the expression of the key virulence regulator TcpP, which leads to the activation of virulence factor production. We further show that one of the three cysteine residues in AphB, C(235), is critical for oxygen responsiveness, as the AphB(C235S) mutant can activate virulence genes under aerobic conditions in vivo and can bind to tcpP promoters in the absence of reducing agents in vitro. Mass spectrometry analysis suggests that under aerobic conditions, AphB is modified at the C(235) residue. This modification is reversible between oxygen-rich aquatic environments and oxygen-limited human hosts, suggesting that V. cholerae may use a thiol-based switch mechanism to sense intestinal signals and activate virulence.

Indexed as

Gene Expression Regulation, BacterialAnaerobiosisBacterial ProteinsCysteineGene Expression ProfilingMutationOxygenPromoter Regions, GeneticProteomicsSulfhydryl CompoundsTrans-ActivatorsTranscriptional ActivationTranscription, GeneticVibrio choleraeVirulenceAphB protein, Vibrio choleraeBacterial ProteinsCysteineOxygenSulfhydryl CompoundsTrans-Activators

Identifiers

PMID21187377
PMCPMC3021084
OpenAlexW2154458025

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.