Evidence map›Paper›PMID 21185069›Full record

ArticleThe Journal of allergy and clinical immunology2011

Induced pluripotent stem cells: a novel frontier in the study of human primary immunodeficiencies.

Itai M Pessach, Jose Ordovas-Montanes, Shen-Ying Zhang, Jean-Laurent Casanova, Silvia Giliani, Andrew R Gennery, Waleed Al-Herz, Philip D Manos, Thorsten M Schlaeger, In-Hyun Park and 5 more

Abstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 42 citations in OpenAlex.

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  5. Exome and genome sequencing for inborn errors of immunity.The Journal of allergy and clinical immunology · 2016
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  18. Advances in basic and clinical immunology in 2011.The Journal of allergy and clinical immunology · 2012
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 10 institutions in 6 countries.

Itai M PessachDivision of Immunology, Children's Hospital Boston, Harvard Medical School, Boston, MA, USA.
Jose Ordovas-Montanes
Shen-Ying Zhang
Jean-Laurent Casanova
Silvia Giliani
Andrew R Gennery
Waleed Al-Herz
Philip D Manos
Thorsten M Schlaeger
In-Hyun Park
Francesca Rucci
Suneet Agarwal
Gustavo Mostoslavsky
George Q Daley
Luigi D Notarangelo
Harvard University · USBoston Children's Hospital · USAl-Sabah Hospital · KWBoston University · USDana-Farber Cancer Institute · USInserm · FRNewcastle University · GBRockefeller University · USTufts University · USUniversity of Brescia · IT

Funding

HARVARD CLINICAL AND TRANSLATIONAL SCIENCE CENTER (UL1)UL1RR025758 · NCRR · HARVARD MEDICAL SCHOOL · PI NADLER, LEE MARSHALL · 2008 to 2011
$91.4M
Human Pluripotent Stem Cell and Progenitor Models of Cardiac and Blood DiseasesU01HL100001 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI DALEY, GEORGE Q, ORKIN, STUART H · 2009 to 2015
$8.9M
The Initiation of B-Cell SignalingZ01AI000898 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI PIERCE, SUSAN · 2001 to 2008
$1.8M
Molecular mechanisms of nuclear reprogrammingK08HL089150 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI AGARWAL, SUNEET · 2008 to 2012
$662k
In vitro differentiation of RAG1-mutated iPS cells and correction by meganucleaseR21AI089810 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI NOTARANGELO, LUIGI DANIELE · 2010 to 2011
$444k
Reprogramming of fibroblasts to pluripotency- a new tool to study Primary ImmunodR03AI088352 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI NOTARANGELO, LUIGI DANIELE · 2010 to 2011
$171k
Intramural NIH HHS Z01 AI000898NCRR NIH HHS UL1 RR025758NHLBI NIH HHS K08 HL089150NHLBI NIH HHS U01 HL100001NIAID NIH HHS 1R03AI088352-01NIAID NIH HHS 1R21AI0898-10-01NIAID NIH HHS R03 AI088352NIAID NIH HHS R21 AI089810
6 · The paper itself

Abstract

backgroundThe novel ability to epigenetically reprogram somatic cells into induced pluripotent stem cells (iPSCs) through the exogenous expression of transcription promises to revolutionize the study of human diseases.

objectiveHere we report on the generation of 25 iPSC lines from 6 patients with various forms of primary immunodeficiencies (PIDs) affecting adaptive immunity, innate immunity, or both.

methodsPatients' dermal fibroblasts were reprogrammed by expression of 4 transcription factors, octamer-binding transcription factor 4 (OCT4), sex determining region Y-box 2 (SOX2), Krueppel-like factor 4 (KLF4), and cellular myelomonocytosis proto-oncogene (cMYC), by using a single excisable polycistronic lentiviral vector.

resultsiPSCs derived from patients with PIDs show a stemness profile that is comparable with that observed in human embryonic stem cells. After in vitro differentiation into embryoid bodies, pluripotency of the patient-derived iPSC lines was demonstrated by expression of genes characteristic of each of the 3 embryonic layers. We have confirmed the patient-specific origin of the iPSC lines and ascertained maintenance of karyotypic integrity.

conclusionBy providing a limitless source of diseased stem cells that can be differentiated into various cell types in vitro, the repository of iPSC lines from patients with PIDs represents a unique resource to investigate the pathophysiology of hematopoietic and extrahematopoietic manifestations of these diseases and might assist in the development of novel therapeutic approaches based on gene correction.

Indexed as

Adaptive ImmunityCell DedifferentiationCell DifferentiationCell LineCell TransdifferentiationDNAGene ExpressionGenes, mycHumansImmunity, InnateImmunologic Deficiency SyndromesInduced Pluripotent Stem CellsKaryotypingKruppel-Like Factor 4Kruppel-Like Transcription FactorsOctamer Transcription Factor-3DNAKLF4 protein, humanKruppel-Like Factor 4Kruppel-Like Transcription FactorsMAS1 protein, humanOctamer Transcription Factor-3POU5F1 protein, humanProto-Oncogene MasSOX2 protein, humanSOXB1 Transcription Factors

Identifiers

PMID21185069
PMCPMC3081993
OpenAlexW1966225821

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.