Evidence map›Paper›PMID 21181945›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2011

Identification and expression patterns of members of the protease-activated receptor (PAR) gene family during zebrafish development.

Hui Xu, Nicholas Echemendia, Songhai Chen, Fang Lin

Abstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Evolution of the protease-activated receptor family in vertebrates.International journal of molecular medicine · 2016
    Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Hui XuDepartment of Anatomy and Cell Biology, Carver College of Medicine, the University of Iowa, Iowa City, Iowa 52242-1109, USA.
Nicholas Echemendia
Songhai Chen
Fang Lin
University of Iowa · USVanderbilt University · US

Funding

G alpha 12/13 Signaling in Zebrafish EmbryogenesisR01GM077770 · NIGMS · WASHINGTON UNIVERSITY · PI SOLNICAKREZEL, LILIANNA · 2006 to 2015
$1.9M
G-protein Signaling in Zebrafish Primordial Germ Cell MigrationR00RR024119 · NCRR · UNIVERSITY OF IOWA · PI LIN, FANG · 2008 to 2010
$747k
G-protein Signaling in Zebrafish Primordial Germ Cell MigrationK99RR024119 · NCRR · VANDERBILT UNIVERSITY · PI LIN, FANG · 2007 to 2008
$166k
NCRR NIH HHS K99R00RR024119NCRR NIH HHS K99 RR024119NCRR NIH HHS R00 RR024119NIGMS NIH HHS R01 GM077770NIGMS NIH HHS R01GM77770
6 · The paper itself

Abstract

Protease-activated receptors (PARs) play critical roles in hemostasis in vertebrates including zebrafish. However, the zebrafish gene classification appears to be complex, and the expression patterns of par genes are not established. Based on analyses of genomic organization, phylogenetics, protein primary structure, and protein internalization, we report the identification of four zebrafish PARs: par1, par2a, par2b, and par3. This classification differs from one reported previously. We also show that these genes have distinct spatiotemporal expression profiles in embryos and larvae, with par1, par2a, and par2b expressed maternally and ubiquitously during gastrula stages and their expression patterns refined at later stages, and par3 expressed only in 3-day-old larvae. Notably, the expression patterns of zebrafish par1 and par2b resemble those of their mammalian counterparts, suggesting that receptor function is conserved among vertebrates. This conservation is supported by our findings that Par1 and Par2b are internalized following exposure to thrombin and trypsin, respectively.

Indexed as

Amino Acid SequenceAnimalsCloning, MolecularEmbryonic DevelopmentEmbryo, NonmammalianGene Expression ProfilingMolecular Sequence DataMultigene FamilyPhylogenyProtein TransportReceptor, PAR-1Receptor, PAR-2Receptors, ThrombinSequence HomologyZebrafishReceptor, PAR-1Receptor, PAR-2Receptors, Thrombin

Identifiers

PMID21181945
PMCPMC3258453
OpenAlexW2059178311

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.