Evidence map›Paper›PMID 21179469›Full record

ArticlePloS one2010

Altered chromosomal positioning, compaction, and gene expression with a lamin A/C gene mutation.

Stephanie K Mewborn, Megan J Puckelwartz, Fida Abuisneineh, John P Fahrenbach, Yuan Zhang, Heather MacLeod, Lisa Dellefave, Peter Pytel, Sara Selig, Christine M Labno and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 115 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Article
  7. Epigenetics inCells · 2023
    Review
  8. Review
  9. Review
  10. Personalized Medicine Approach in a DCM Patient withJournal of personalized medicine · 2022
    Article
  11. Article
  12. The Nuclear Lamina.Cold Spring Harbor perspectives in biology · 2022
    Review
  13. Genome organization in cardiomyocytes expressing mutated A-type lamins.Frontiers in cell and developmental biology · 2022
    Review
  14. Review
  15. The Role of Emerin in Cancer Progression and Metastasis.International journal of molecular sciences · 2021
    Review
  16. Article
  17. Article
  18. Review
  19. Three-dimensional chromatin organization in cardiac development and disease.Journal of molecular and cellular cardiology · 2021
    Review
  20. Nucleus-Cytoskeleton Crosstalk During Mitotic Entry.Frontiers in cell and developmental biology · 2021
    Review

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Stephanie K MewbornDepartment of Medicine, The University of Chicago, Chicago, Illinois, United States of America.
Megan J Puckelwartz
Fida Abuisneineh
John P Fahrenbach
Yuan Zhang
Heather MacLeod
Lisa Dellefave
Peter Pytel
Sara Selig
Christine M Labno
Karen Reddy
Harinder Singh
Elizabeth McNally
University of Chicago · USRambam Health Care Campus · IL

Funding

Nuclear membrane protein interaction in heart and muscle diseaseR01HL092443 · NHLBI · UNIVERSITY OF CHICAGO · PI MCNALLY, ELIZABETH M · 2008 to 2011
$1.5M
Howard Hughes Medical InstituteNHLBI NIH HHS HL092443NHLBI NIH HHS R01 HL092443
6 · The paper itself

Abstract

backgroundLamins A and C, encoded by the LMNA gene, are filamentous proteins that form the core scaffold of the nuclear lamina. Dominant LMNA gene mutations cause multiple human diseases including cardiac and skeletal myopathies. The nuclear lamina is thought to regulate gene expression by its direct interaction with chromatin. LMNA gene mutations may mediate disease by disrupting normal gene expression. METHODS/

findingsTo investigate the hypothesis that mutant lamin A/C changes the lamina's ability to interact with chromatin, we studied gene misexpression resulting from the cardiomyopathic LMNA E161K mutation and correlated this with changes in chromosome positioning. We identified clusters of misexpressed genes and examined the nuclear positioning of two such genomic clusters, each harboring genes relevant to striated muscle disease including LMO7 and MBNL2. Both gene clusters were found to be more centrally positioned in LMNA-mutant nuclei. Additionally, these loci were less compacted. In LMNA mutant heart and fibroblasts, we found that chromosome 13 had a disproportionately high fraction of misexpressed genes. Using three-dimensional fluorescence in situ hybridization we found that the entire territory of chromosome 13 was displaced towards the center of the nucleus in LMNA mutant fibroblasts. Additional cardiomyopathic LMNA gene mutations were also shown to have abnormal positioning of chromosome 13, although in the opposite direction.

conclusionsThese data support a model in which LMNA mutations perturb the intranuclear positioning and compaction of chromosomal domains and provide a mechanism by which gene expression may be altered.

Indexed as

Chromosome MappingGene Expression RegulationMutationAdultCardiomyopathiesCell NucleusFibroblastsGenes, DominantHumansIn Situ Hybridization, FluorescenceLamin Type AMaleMicroscopy, FluorescenceMyocardiumlamin CLamin Type A

Identifiers

PMID21179469
PMCPMC3001866
OpenAlexW2016656670

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.