Evidence map›Paper›PMID 21177929›Full record

ArticleThe Journal of general virology2011

The subcellular localization of the hepatitis C virus non-structural protein NS2 is regulated by an ion channel-independent function of the p7 protein.

Philip Tedbury, Sarah Welbourn, Arnim Pause, Barnabas King, Stephen Griffin, Mark Harris

Open access · hybridAbstract read
In one paragraph

Article in The Journal of general virology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
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  10. Targeting the Channel Activity of Viroporins.Advances in protein chemistry and structural biology · 2016
    Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
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  17. Review
  18. The intraviral protein interaction network of hepatitis C virus.Molecular & cellular proteomics : MCP · 2014
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Philip TedburyInstitute of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.
Sarah Welbourn
Arnim Pause
Barnabas King
Stephen Griffin
Mark Harris
Institute of Structural and Molecular Biology · GBMcGill University · CAUniversity of Leeds · GB

Funding

Medical Research Council G0700124Wellcome Trust 082812
6 · The paper itself

Abstract

The hepatitis C virus (HCV) p7 ion channel and non-structural protein 2 (NS2) are both required for efficient assembly and release of nascent virions, yet precisely how these proteins are able to influence this process is unclear. Here, we provide both biochemical and cell biological evidence for a functional interaction between p7 and NS2. We demonstrate that in the context of a genotype 1b subgenomic replicon the localization of NS2 is affected by the presence of an upstream p7 with its cognate signal peptide derived from the C terminus of E2 (SPp7). Immunofluorescence analysis revealed that the presence of SPp7 resulted in the targeting of NS2 to sites closely associated with viral replication complexes. In addition, biochemical analysis demonstrated that, in the presence of SPp7, a significant proportion of NS2 was found in a detergent (Triton X-100)-insoluble fraction, which also contained a marker of detergent resistant rafts. In contrast, in replicons lacking p7, NS2 was entirely detergent soluble and the altered localization was lost. Furthermore, we found that serine 168 within NS2 was required for its localization adjacent to replication complexes, but not for its accumulation in the detergent-insoluble fraction. NS2 physically interacted with NS5A and this interaction was dependent on both p7 and serine 168 within NS2. Mutational and pharmacological analyses demonstrated that these effects were not a consequence of p7 ion channel function, suggesting that p7 possesses an alternative function that may influence the coordination of virus genome replication and particle assembly.

Indexed as

Protein Interaction MappingAmino Acid SubstitutionHepacivirusHumansMutant ProteinsProtein BindingRNA-Dependent RNA PolymeraseViral Nonstructural ProteinsViral ProteinsViroporin ProteinsMutant ProteinsNS2 protein, Hepatitis C virusNS-5 protein, hepatitis C virusp7 protein, Hepatitis C virusRNA-Dependent RNA PolymeraseViral Nonstructural ProteinsViral ProteinsViroporin Proteins

Identifiers

PMID21177929
PMCPMC3133701
OpenAlexW2117256797

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.