Evidence map›Paper›PMID 21177653›Full record

ArticleNucleic acids research2011

c-MYC coordinately regulates ribosomal gene chromatin remodeling and Pol I availability during granulocyte differentiation.

Gretchen Poortinga, Meaghan Wall, Elaine Sanij, Kasia Siwicki, Jason Ellul, Daniel Brown, Timothy P Holloway, Ross D Hannan, Grant A McArthur

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 99 citations in OpenAlex.

  1. Trial
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  6. The Interplay Between theInternational journal of molecular sciences · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Article
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  12. Article
  13. MYC function and regulation in physiological perspective.Frontiers in cell and developmental biology · 2023
    Review
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  16. Review
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Gretchen PoortingaDivision of Research, Peter MacCallum Cancer Centre, St Andrews Place, East Melbourne, Victoria, Australia. gretchen.poortinga@petermac.org
Meaghan Wall
Elaine Sanij
Kasia Siwicki
Jason Ellul
Daniel Brown
Timothy P Holloway
Ross D Hannan
Grant A McArthur
The University of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Loss of c-MYC is required for downregulation of ribosomal RNA (rRNA) gene (rDNA) transcription by RNA Polymerase I (Pol I) during granulocyte differentiation. Here, we demonstrate a robust reduction of Pol I loading onto rDNA that along with a depletion of the MYC target gene upstream binding factor (UBF) and a switch from epigenetically active to silent rDNA accompanies this MYC reduction. We hypothesized that MYC may coordinate these mechanisms via direct regulation of multiple components of the Pol I transcription apparatus. Using gene expression arrays we identified a 'regulon' of Pol I factors that are both downregulated during differentiation and reinduced in differentiated granulocytes upon activation of the MYC-ER transgene. This regulon includes the novel c-MYC target genes RRN3 and POLR1B. Although enforced MYC expression during granulocyte differentiation was sufficient to increase the number of active rRNA genes, its activation in terminally differentiated cells did not alter the active to inactive gene ratio despite increased rDNA transcription. Thus, c-MYC dynamically controls rDNA transcription during granulocytic differentiation through the orchestrated transcriptional regulation of core Pol I factors and epigenetic modulation of number of active rRNA genes.

Indexed as

Genes, rRNACell DifferentiationCell LineChromatin Assembly and DisassemblyDNA Polymerase IDNA, RibosomalGene Expression ProfilingGranulocytesNeutrophilsPol1 Transcription Initiation Complex ProteinsProto-Oncogene Proteins c-mycTranscription, GeneticDNA Polymerase IDNA, RibosomalPol1 Transcription Initiation Complex ProteinsProto-Oncogene Proteins c-myctranscription factor UBF

Identifiers

PMID21177653
PMCPMC3082905
OpenAlexW2092175362

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.