Evidence map›Paper›PMID 21176037›Full record

ArticleTraffic (Copenhagen, Denmark)2011

Phosphoinositides direct equine infectious anemia virus gag trafficking and release.

Fiona Fernandes, Kang Chen, Lorna S Ehrlich, Jing Jin, Min H Chen, Gisselle N Medina, Marc Symons, Ronald Montelaro, Julie Donaldson, Nico Tjandra and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Traffic (Copenhagen, Denmark), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
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  5. Atomic view of the HIV-1 matrix lattice; implications on virus assembly and envelope incorporation.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Fiona FernandesDepartment of Molecular Genetics & Microbiology, Life Sciences Building, Room 248, Stony Brook University, Stony Brook, NY 11794, USA.
Kang Chen
Lorna S Ehrlich
Jing Jin
Min H Chen
Gisselle N Medina
Marc Symons
Ronald Montelaro
Julie Donaldson
Nico Tjandra
Carol A Carter
Stony Brook University · USFeinstein Institute for Medical Research · USNational Institutes of Health · USUniversity of Pittsburgh · USYale University · US

Funding

Regulation of mitochondria morphologyZIAHL006064 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI TJANDRA, NICO · 2010 to 2025
$20.9M
Mechanisms of Clathrin-Independent EndocytosisZIAHL006130 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI DONALDSON, JULIE G · 2011 to 2018
$5.8M
Pathways and mechanisms of clathrin-independent endocytosisZIAHL006060 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI DONALDSON, JULIE G · 2010 to 2018
$5.7M
Cellular Proteins Involved in Trafficking of HIV-1R01AI068463 · NIAID · STATE UNIVERSITY NEW YORK STONY BROOK · PI CARTER, CAROL A · 2007 to 2010
$1.4M
Cellular Proteins Involved in Trafficking of HIV-1R56AI068463 · NIAID · STATE UNIVERSITY NEW YORK STONY BROOK · PI CARTER, CAROL A · 2006 to 2012
$774k
Intramural NIH HHSNIAID NIH HHS R01 AI068463NIAID NIH HHS R56 AI068463
6 · The paper itself

Abstract

Phosphatidylinositol 4,5-biphosphate [PI(4,5)P(2) ], the predominant phosphoinositide (PI) on the plasma membrane, binds the matrix (MA) protein of human immunodeficiency virus type 1 (HIV-1) and equine infectious anemia virus (EIAV) with similar affinities in vitro. Interaction with PI(4,5)P(2) is critical for HIV-1 assembly on the plasma membrane. EIAV has been shown to localize in internal compartments; hence, the significance of its interaction with PI(4,5)P(2) is unclear. We therefore investigated the binding in vitro of other PIs to EIAV MA and whether intracellular association with compartments bearing these PIs was important for assembly and release of virus-like particles (VLPs) formed by Gag. In vitro, EIAV MA bound phosphatidylinositol 3-phosphate [PI(3)P] with higher affinity than PI(4,5)P(2) as revealed by nuclear magnetic resonance (NMR) spectra upon lipid titration. Gag was detected on the plasma membrane and in compartments enriched in phosphatidylinositol 3,5-biphosphate [PI(3,5)P(2) ]. Treatment of cells with YM201636, a kinase inhibitor that blocks production of PI(3,5)P(2) from PI(3)P, caused Gag to colocalize with aberrant compartments and inhibited VLP release. In contrast to HIV-1, release of EIAV VLPs was not significantly diminished by coexpression with 5-phosphatase IV, an enzyme that specifically depletes PI(4,5)P(2) from the plasma membrane. However, coexpression with synaptojanin 2, a phosphatase with broader specificity, diminished VLP production. PI-binding pocket mutations caused striking budding defects, as revealed by electron microscopy. One of the mutations also modified Gag-Gag interaction, as suggested by altered bimolecular fluorescence complementation. We conclude that PI-mediated targeting to peripheral and internal membranes is a critical factor in EIAV assembly and release.

Indexed as

Acid Anhydride HydrolasesAminopyridinesAnimalsAntiviral AgentsCell MembraneCells, CulturedChlorocebus aethiopsCOS CellsGene Products, gagHeterocyclic Compounds, 3-RingHIV-1HorsesHumansInfectious Anemia Virus, EquineMutationPhosphatidylinositol Phosphates6-amino-N-(3-(4-(4-morpholinyl)pyrido(3',2'-4,5)furo(3,2-d)pyrimidin-2-yl)phenyl)-3-pyridinecarboxamideAcid Anhydride HydrolasesAminopyridinesAntiviral AgentsendopolyphosphataseGene Products, gagHeterocyclic Compounds, 3-RingPhosphatidylinositol Phosphates

Identifiers

PMID21176037
PMCPMC3064743
OpenAlexW2063613016

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.