Evidence map›Paper›PMID 21174448›Full record

ArticleBiochemistry2011

Structure of a slow CLC Cl⁻/H+ antiporter from a cyanobacterium.

Hariharan Jayaram, Janice L Robertson, Fang Wu, Carole Williams, Christopher Miller

Erratum issuedAbstract readComparative Study
In one paragraph

Article in Biochemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Divergent CleLife · 2020
    Article
  3. Mutation of external glutamate residue reveals a new intermediate transport state and anion binding site in a CLC ClProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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  9. Review
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  16. Article
  17. Article
  18. Prerequisites to proton transport in the bacterial ClC-ec1 Cl-/H+ exchanger.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hariharan JayaramDepartment of Biochemistry, Howard Hughes Medical Institute, Brandeis University, Waltham, Massachusetts 02454, United States.
Janice L Robertson
Fang Wu
Carole Williams
Christopher Miller
Howard Hughes Medical Institute · US

Funding

LIPOSOME-PATCH RECORDING O RECONSTITUTED ION CHANNELSR01GM031768 · NIGMS · BRANDEIS UNIVERSITY · PI MILLER, CHRISTOPHER · 1985 to 2009
$2.1M
BASIC MECHANISMS OF ION CHANNEL FUNCTIONR37GM031768 · NIGMS · BRANDEIS UNIVERSITY · PI MILLER, CHRISTOPHER · 1991 to 2000
$214k
NIGMS NIH HHS GM-31768NIGMS NIH HHS R01 GM031768NIGMS NIH HHS R37 GM031768
6 · The paper itself

Abstract

X-ray crystal structures have been previously determined for three CLC-type transporter homologues, but the absolute unitary transport rate is known for only one of these. The Escherichia coli Cl(-)/H(+) antiporter (EC) moves ∼2000 Cl(-) ions/s, an exceptionally high rate among membrane-transport proteins. It is not known whether such rapid turnover is characteristic of ClCs in general or if the E. coli homologue represents a functional outlier. Here, we characterize a CLC Cl(-)/H(+) antiporter from the cyanobacterium Synechocystis sp. PCC6803 (SY) and determine its crystal structure at 3.2 Å resolution. The structure of SY is nearly identical to that of EC, with all residues involved in Cl(-) binding and proton coupling structurally similar to their equivalents in EC. SY actively pumps protons into liposomes against a gradient and moves Cl(-) at ∼20 s(-1), 1% of the EC rate. Electrostatic calculations, used to identify residues contributing to ion binding energetics in SY and EC, highlight two residues flanking the external binding site that are destabilizing for Cl(-) binding in SY and stabilizing in EC. Mutation of these two residues in SY to their counterparts in EC accelerates transport to ∼150 s(-1), allowing measurement of Cl(-)/H(+) stoichiometry of 2/1. SY thus shares a similar structure and a common transport mechanism to EC, but it is by comparison slow, a result that refutes the idea that the transport mechanism of CLCs leads to intrinsically high rates.

Indexed as

Amino Acid SequenceAntiportersBacterial ProteinsChloride ChannelsChloridesCrystallography, X-RayEscherichia coliEscherichia coli ProteinsHydrogenKineticsMolecular Sequence DataMutationProtein Structure, SecondarySequence AlignmentSynechocystisAntiportersBacterial ProteinsChloride ChannelsChloridesClC protein, E coliEscherichia coli ProteinsHydrogenhydrogen-chloride symporter

Identifiers

PMID21174448
PMCPMC3164822
OpenAlexW2069179913

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.