Evidence map›Paper›PMID 21174394›Full record

ArticleOrganic letters2011

Histone deacetylase inhibitors as a tool to up-regulate new fungal biosynthetic products: isolation of EGM-556, a cyclodepsipeptide, from Microascus sp.

Hélène C Vervoort, Marija Drašković, Phillip Crews

Abstract read
In one paragraph

Article in Organic letters, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hélène C VervoortDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, USA.
Marija Drašković
Phillip Crews

Funding

Targeted Discovery of Marine-derived Anticancer LeadsU19CA052955 · NCI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI GERWICK, WILLIAM HENRY · 1995 to 2009
$9.7M
DISCOVERY OF ANTITUMOR MARINE PRODUCTS BY MECHU01CA052955 · NCI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI CREWS, PHIL · 1990 to 1995
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NCI NIH HHS CA 052955NCI NIH HHS U19 CA052955
6 · The paper itself

Abstract

The histone deacetylase (HDAC) inhibitor suberoylanilide hydroxamic acid (SAHA) was used to turn on the biosynthesis of EGM-556, a new cyclodepsipeptide of hybrid biosynthetic origin, isolated from the Floridian marine sediment-derived fungus Microascus sp. The absolute configurations of three chiral centers were determined by Marfey's derivatization. EGM-556 represents one of the few examples in which silent biosynthetic genes, encoding a new secondary metabolite, were activated by means of epigenetic manipulation of the fungal metabolome.

Indexed as

Histone Deacetylase InhibitorsAscomycotaDepsipeptidesFloridaHydroxamic AcidsMarine BiologyVorinostatDepsipeptidesEGM-556Histone Deacetylase InhibitorsHydroxamic AcidsVorinostat

Identifiers

PMID21174394
PMCPMC3031758

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.