Evidence map›Paper›PMID 21173787›Full record

ArticleThe pharmacogenomics journal2012

Three-gene predictor of clinical outcome for gastric cancer patients treated with chemotherapy.

H K Kim, I J Choi, C G Kim, H S Kim, A Oshima, Y Yamada, T Arao, K Nishio, A Michalowski, J E Green

Open access · hybridAbstract readValidation Study
In one paragraph

Article in The pharmacogenomics journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it, 64 citations in OpenAlex.

  1. Systematic Review of Prognostic Gene Signature in Gastric Cancer Patients.Frontiers in bioengineering and biotechnology · 2020
    Pooled it
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  7. Genes · 2023
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  20. UNR/Journal of clinical medicine · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

H K KimLaboratory of Cancer Biology and Genetics, National Cancer Institute, Bethesda, MD 20892, USA.
I J Choi
C G Kim
H S Kim
A Oshima
Y Yamada
T Arao
K Nishio
A Michalowski
J E Green
National Cancer Institute · USNational Cancer Center · KRKindai University · JP

Funding

Intramural NIH HHS
6 · The paper itself

Abstract

To identify transcriptional profiles predictive of the clinical benefit of cisplatin and fluorouracil (CF) chemotherapy to gastric cancer patients, endoscopic biopsy samples from 96 CF-treated metastatic gastric cancer patients were prospectively collected before therapy and analyzed using high-throughput transcriptional profiling and array comparative genomic hybridization. Transcriptional profiling identified 917 genes that are correlated with poor patient survival after CF at P<0.05 (poor prognosis signature), in which protein synthesis and DNA replication/recombination/repair functional categories are enriched. A survival risk predictor was then constructed using genes, which are included in the poor prognosis signature and are contained within identified genomic amplicons. The combined expression of three genes-MYC, EGFR and FGFR2-was an independent predictor for overall survival of 27 CF-treated patients in the validation set (adjusted P=0.017), and also for survival of 40 chemotherapy-treated gastric cancer patients in a published data set (adjusted P=0.026). Thus, combined expression of MYC, EGFR and FGFR2 is predictive of poor survival in CF-treated metastatic gastric cancer patients.

Indexed as

Genes, mycAgedAntineoplastic AgentsErbB ReceptorsFemaleHumansMaleNeoplasm MetastasisPrognosisProspective StudiesReceptor, Fibroblast Growth Factor, Type 2Stomach NeoplasmsSurvival AnalysisTreatment OutcomeAntineoplastic AgentsErbB ReceptorsFGFR2 protein, humanReceptor, Fibroblast Growth Factor, Type 2

Identifiers

PMID21173787
PMCPMC3321506
OpenAlexW2036419442

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.