Evidence map›Paper›PMID 21173273›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Derivation of Ca2+ signals from puff properties reveals that pathway function is robust against cell variability but sensitive for control.

Kevin Thurley, Martin Falcke

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. A CaJournal of mathematical biology · 2025
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  4. Article
  5. Article
  6. An integrate-and-fire approach to CaBiophysical journal · 2023
    Article
  7. Modeling IPBiophysical journal · 2023
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  8. An integrate-and-fire approach to CaBiophysical journal · 2023
    Article
  9. Characterizing spontaneous CaBiophysical journal · 2022
    Article
  10. Modeling of CaBBA advances · 2021
    Article
  11. IPiScience · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Kevin ThurleyMathematical Cell Physiology, Max Delbrück Center for Molecular Medicine, Robert Rössle Strasse 10, 13092 Berlin, Germany.
Martin Falcke

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ca(2+) is a universal second messenger in eukaryotic cells transmitting information through sequences of concentration spikes. A prominent mechanism to generate these spikes involves Ca(2+) release from the endoplasmic reticulum Ca(2+) store via inositol 1,4,5-trisphosphate (IP(3))-sensitive channels. Puffs are elemental events of IP(3)-induced Ca(2+) release through single clusters of channels. Intracellular Ca(2+) dynamics are a stochastic system, but a complete stochastic theory has not been developed yet. We formulate the theory in terms of interpuff interval and puff duration distributions because, unlike the properties of individual channels, they can be measured in vivo. Our theory reproduces the typical spectrum of Ca(2+) signals like puffs, spiking, and bursting in analytically treatable test cases as well as in more realistic simulations. We find conditions for spiking and calculate interspike interval (ISI) distributions. Signal form, average ISI and ISI distributions depend sensitively on the details of cluster properties and their spatial arrangement. In contrast to that, the relation between the average and the standard deviation of ISIs does not depend on cluster properties and cluster arrangement and is robust with respect to cell variability. It is controlled by the global feedback processes in the Ca(2+) signaling pathway (e.g., via IP(3)-3-kinase or endoplasmic reticulum depletion). That relation is essential for pathway function because it ensures frequency encoding despite the randomness of ISIs and determines the maximal spike train information content. Hence, we find a division of tasks between global feedbacks and local cluster properties that guarantees robustness of function while maintaining sensitivity of control of the average ISI.

Indexed as

Models, BiologicalCalciumCalcium SignalingEndoplasmic ReticulumFeedback, PhysiologicalInositol 1,4,5-Trisphosphate ReceptorsStochastic ProcessesSystems BiologyTime FactorsCalciumInositol 1,4,5-Trisphosphate Receptors

Identifiers

PMID21173273
PMCPMC3017167

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.