Evidence map›Paper›PMID 21173231›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Receptor-type guanylate cyclase is required for carbon dioxide sensation by Caenorhabditis elegans.

Elissa A Hallem, W Clay Spencer, Rebecca D McWhirter, Georg Zeller, Stefan R Henz, Gunnar Rätsch, David M Miller, H Robert Horvitz, Paul W Sternberg, Niels Ringstad

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 138 citations in OpenAlex.

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  13. iScience · 2024
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  17. A standard workflow for community-driven manual curation ofPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
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  18. Differential processing of a chemosensory cue across life stages sharing the same valence state inProceedings of the National Academy of Sciences of the United States of America · 2023
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  19. Review
  20. Article

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Elissa A HallemHoward Hughes Medical Institute, Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA.
W Clay Spencer
Rebecca D McWhirter
Georg Zeller
Stefan R Henz
Gunnar Rätsch
David M Miller
H Robert Horvitz
Paul W Sternberg
Niels Ringstad
Howard Hughes Medical Institute · USVanderbilt University · USMax Planck Society · DEMax Planck Institute for Developmental Biology · DE

Funding

Genetic Analysis of Nematode Egg Laying and Co-regulated Behavioral SystemsR01GM024663 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HORVITZ, H ROBERT · 1985 to 2025
$10.1M
Global Identification of transcribed elements in the C. elegans genomeU01HG004263 · NHGRI · UNIVERSITY OF WASHINGTON · PI WATERSTON, ROBERT H · 2007 to 2011
$7.3M
MOLECULAR GENETICS OF NEURAL SPECIFICITYR01NS026115 · NINDS · VANDERBILT UNIVERSITY · PI MILLER, DAVID M · 1994 to 2010
$3.0M
Mechanisms of carbon dioxide response in nematodesR00AI085107 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HALLEM, ELISSA ANYON · 2011 to 2012
$487k
Howard Hughes Medical InstituteNHGRI NIH HHS U01 HG004263NIAID NIH HHS R00 AI085107NIGMS NIH HHS R01 GM024663NIGMS NIH HHS R01 GM24663NINDS NIH HHS R01 NS026115NINDS NIH HHS R01 NS26115
6 · The paper itself

Abstract

CO(2) is both a critical regulator of animal physiology and an important sensory cue for many animals for host detection, food location, and mate finding. The free-living soil nematode Caenorhabditis elegans shows CO(2) avoidance behavior, which requires a pair of ciliated sensory neurons, the BAG neurons. Using in vivo calcium imaging, we show that CO(2) specifically activates the BAG neurons and that the CO(2)-sensing function of BAG neurons requires TAX-2/TAX-4 cyclic nucleotide-gated ion channels and the receptor-type guanylate cyclase GCY-9. Our results delineate a molecular pathway for CO(2) sensing and suggest that activation of a receptor-type guanylate cyclase is an evolutionarily conserved mechanism by which animals detect environmental CO(2).

Indexed as

AnimalsBase SequenceBiological EvolutionCaenorhabditis elegansCaenorhabditis elegans ProteinsCarbon DioxideChemotaxisCluster AnalysisDNA PrimersGene ComponentsGuanylate CyclaseIon ChannelsMicroscopy, ConfocalMolecular Sequence DataNeuronsPhylogenyCaenorhabditis elegans ProteinsCarbon DioxideDNA PrimersGCY-9 protein, C elegansGuanylate CyclaseIon ChannelsReceptors, Guanylate Cyclase-Coupledtax-2 protein, C eleganstax-4 protein, C elegans

Identifiers

PMID21173231
PMCPMC3017194
OpenAlexW2040314018

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.