Evidence map›Paper›PMID 21172661›Full record

ArticleMolecular cell2010

Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells.

Katie L Zobeck, Martin S Buckley, Warren R Zipfel, John T Lis

Abstract read
In one paragraph

Article in Molecular cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed.

  1. Article
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  18. Article
  19. Transcription Factor Dynamics.Cold Spring Harbor perspectives in biology · 2021
    Review
  20. Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Katie L ZobeckDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA.
Martin S Buckley
Warren R Zipfel
John T Lis

Funding

COORDINATE GENE REGULATION IN ANIMAL CELLSR01GM025232 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIS, JOHN T · 1985 to 2020
$8.4M
COORDINATE GENE REGULATION IN ANIMAL CELLSR37GM025232 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIS, JOHN THOMAS · 1995 to 2004
$2.5M
Molecular dynamics of transcription factors at HS loci in living cellsF32GM087003 · NIGMS · CORNELL UNIVERSITY · PI BUCKLEY, MARTIN S · 2009 to 2011
$151k
NIGMS NIH HHS F32 GM087003NIGMS NIH HHS GM087003NIGMS NIH HHS GM25232NIGMS NIH HHS R01 GM025232NIGMS NIH HHS R37 GM025232
6 · The paper itself

Abstract

Chromatin immunoprecipitation (ChIP) studies provide snapshots of factors on chromatin in cell populations. Here, we use live-cell imaging to examine at high temporal resolution the recruitment and dynamics of transcription factors to the inducible Hsp70 loci in individual Drosophila salivary gland nuclei. Recruitment of the master regulator, HSF, is first detected within 20 s of gene activation; the timing of its recruitment resolves from RNA polymerase II and P-TEFb, and these factors resolve from Spt6 and Topo I. Remarkably, the recruitment of each factor is highly synchronous between different cells. In addition, fluorescence recovery after photobleaching (FRAP) analyses show that the entry and exit of multiple factors are progressively constrained upon gene activation, suggesting the gradual formation of a transcription compartment. Furthermore, we demonstrate that poly(ADP-ribose) (PAR) polymerase activity is required to maintain the transcription compartment. We propose that PAR polymers locally retain factors in a transcription compartment.

Indexed as

AnimalsCell NucleusCell SurvivalDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsHeat Shock Transcription FactorsHSP70 Heat-Shock ProteinsPositive Transcriptional Elongation Factor BRNA Polymerase IISalivary GlandsTime FactorsTranscription FactorsDNA-Binding ProteinsDrosophila ProteinsHeat Shock Transcription FactorsHsf protein, DrosophilaHSP70 Heat-Shock ProteinsPositive Transcriptional Elongation Factor BRNA Polymerase IITranscription Factors

Identifiers

PMID21172661
PMCPMC3021954

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.