Evidence map›Paper›PMID 21169492›Full record

ArticleJournal of bacteriology2011

H-NS binding and repression of the ctx promoter in Vibrio cholerae.

Emily A Stonehouse, Robin R Hulbert, Melinda B Nye, Karen Skorupski, Ronald K Taylor

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Serotype conversion geneFrontiers in microbiology · 2023
    Article
  6. Article
  7. Article
  8. Targeting of cholera toxin A (Research in pharmaceutical sciences · 2020
    Article
  9. Article
  10. Article
  11. Transcription of Bacterial Chromatin.Journal of molecular biology · 2019
    Review
  12. Article
  13. Conversion of aFrontiers in microbiology · 2019
    Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Vibrio cholerae Biofilms and Cholera Pathogenesis.PLoS neglected tropical diseases · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Emily A StonehouseDepartment of Microbiology and Immunology, Dartmouth Medical School, Hanover, NH 03755, USA.
Robin R Hulbert
Melinda B Nye
Karen Skorupski
Ronald K Taylor
Dartmouth College · US

Funding

HOST-MICROBE INTERACTIONST32AI007519 · NIAID · DARTMOUTH COLLEGE · PI DEBORAH A HOGAN · 1997 to 2026
$5.9M
HIERARCHY WITHIN ENVIRONMENTAL REGULONSR01AI039654 · NIAID · DARTMOUTH COLLEGE · PI TAYLOR, RONALD K · 1996 to 2011
$3.3M
New Mechanisms for Regulating Virulence Gene ExpressionR01AI041558 · NIAID · DARTMOUTH COLLEGE · PI SKORUPSKI, KAREN A · 2002 to 2011
$3.1M
Hierarchy Within Environmental RegulonsR56AI039654 · NIAID · DARTMOUTH COLLEGE · PI TAYLOR, RONALD K · 2014 to 2014
$405k
NEW MECHANISMS FOR REGULATING VIRULENCE GENE EXPRESSIONR29AI041558 · NIAID · DARTMOUTH COLLEGE · PI SKORUPSKI, KAREN A · 1997 to 2001
$240k
NIAID NIH HHS AI007519NIAID NIH HHS AI039654NIAID NIH HHS AI041558NIAID NIH HHS R01 AI039654NIAID NIH HHS R01 AI041558NIAID NIH HHS R29 AI041558NIAID NIH HHS R56 AI039654NIAID NIH HHS T32 AI007519
6 · The paper itself

Abstract

Expression of the ctx and tcp genes, which encode cholera toxin and the toxin coregulated pilus, the Vibrio cholerae O1 virulence determinants having the largest contribution to cholera disease, is repressed by the nucleoid-associated protein H-NS and activated by the AraC-like transcriptional regulator ToxT. To elucidate the molecular mechanism by which H-NS controls transcription of the ctxAB operon, H-NS repression and binding were characterized by using a promoter truncation series, gel mobility shift assays, and DNase I footprinting. Promoter regions found to be important for H-NS repression correlated with in vitro binding. Four main H-NS binding regions are present at ctx. One region overlaps the high-affinity ToxT binding site and extends upstream, another overlaps the ToxT low-affinity binding site around the -35 element, and the remaining two are located adjacent to one another downstream of the transcriptional start site. Competition for binding to the overlapping H-NS/ToxT binding sites was observed in gel mobility shift assays, where ToxT was found to displace H-NS from the ctx promoter region. In addition, regulatory differences between the ctx and tcpA promoters were examined. H-NS was found to have a higher relative binding affinity for the ctx promoter than for the tcpA promoter in vitro. In contrast to ToxT-dependent activation of the tcpA promoter, ToxT activation of ctx did not require the C-terminal domain of the α-subunit of RNA polymerase. These findings demonstrate that transcriptional regulation of ctx and tcpA by H-NS and ToxT is mechanistically distinct, and this may lead to important differences in the expression of these coregulated genes.

Indexed as

Gene Expression Regulation, BacterialPromoter Regions, GeneticBacterial ProteinsBase SequenceBinding SitesCholera ToxinDNA-Binding ProteinsDown-RegulationMolecular Sequence DataProtein BindingVibrio choleraeBacterial ProteinsCholera ToxinDNA-Binding ProteinsH-NS protein, bacteria

Identifiers

PMID21169492
PMCPMC3028689
OpenAlexW1968811051

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.