Evidence map›Paper›PMID 21169417›Full record

ArticleEukaryotic cell2011

Differential regulation of the cellulase transcription factors XYR1, ACE2, and ACE1 in Trichoderma reesei strains producing high and low levels of cellulase.

Thomas Portnoy, Antoine Margeot, Verena Seidl-Seiboth, Stéphane Le Crom, Fadhel Ben Chaabane, Rita Linke, Bernhard Seiboth, Christian P Kubicek

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 169 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Promoters and Synthetic Promoters in Trichoderma reesei.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. A Combined Study on Optimization,Biochemistry research international · 2022
    Review
  18. Why Is the Correct Selection ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  19. Review
  20. Global Transcriptome Profile of the Oleaginous YeastJournal of fungi (Basel, Switzerland) · 2021
    Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Thomas PortnoyIFP Energies nouvelles, Département Biotechnologie, 1-4 Avenue de Bois-Préau, 92852 Rueil-Malmaison Cedex, France.
Antoine Margeot
Verena Seidl-Seiboth
Stéphane Le Crom
Fadhel Ben Chaabane
Rita Linke
Bernhard Seiboth
Christian P Kubicek
TU Wien · ATIFP Énergies nouvelles · FRInstitut de Biologie de l'École Normale Supérieure · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Due to its capacity to produce large amounts of cellulases, Trichoderma reesei is increasingly being investigated for second-generation biofuel production from lignocellulosic biomass. The induction mechanisms of T. reesei cellulases have been described recently, but the regulation of the genes involved in their transcription has not been studied thoroughly. Here we report the regulation of expression of the two activator genes xyr1 and ace2, and the corepressor gene ace1, during the induction of cellulase biosynthesis by the inducer lactose in T. reesei QM 9414, a strain producing low levels of cellulase (low producer). We show that all three genes are induced by lactose. xyr1 was also induced by d-galactose, but this induction was independent of d-galactose metabolism. Moreover, ace1 was carbon catabolite repressed, whereas full induction of xyr1 and ace2 in fact required CRE1. Significant differences in these regulatory patterns were observed in the high-producer strain RUT C30 and the hyperproducer strain T. reesei CL847. These observations suggest that a strongly elevated basal transcription level of xyr1 and reduced upregulation of ace1 by lactose may have been important for generating the hyperproducer strain and that thus, these genes are major control elements of cellulase production.

Indexed as

CellulaseFungal ProteinsGalactoseGene Expression ProfilingGene Expression Regulation, FungalGlucoseLactoseTranscription FactorsTrichodermaUp-RegulationCellulaseFungal ProteinsGalactoseGlucoseLactoseTranscription Factors

Identifiers

PMID21169417
PMCPMC3067402
OpenAlexW2127161084

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.