Evidence map›Paper›PMID 21169346›Full record

ArticlePlant & cell physiology2011

Light-regulated nuclear import and degradation of Arabidopsis phytochrome-A N-terminal fragments.

Iris Wolf, Stefan Kircher, Erzsébet Fejes, László Kozma-Bognár, Eberhard Schäfer, Ferenc Nagy, Eva Adám

Open access · bronzeAbstract read
In one paragraph

Article in Plant & cell physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

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  13. Photobodies in light signaling.Plant physiology · 2012
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Iris WolfInstitute of Botany, Biology II, University of Freiburg, Schänzlestrasse 1, D-79104 Freiburg, Germany.
Stefan Kircher
Erzsébet Fejes
László Kozma-Bognár
Eberhard Schäfer
Ferenc Nagy
Eva Adám
HUN-REN Szegedi Biológiai Kutatóközpont · HUUniversity of Freiburg · DEUniversity of Edinburgh · GB

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

The photoreceptor phytochrome-A (phyA) regulates germination and seedling establishment by mediating very low fluence (VLFR) and far-red high irradiance (FR-HIR) responses in Arabidopsis thaliana. In darkness, phyA homodimers exist in the biologically inactive Pr form and are localized in the cytoplasm. Light induces formation of the biologically active Pfr form and subsequent rapid nuclear import. PhyA Pfr, in contrast to the Pr form, is labile and has a half-life of ∼30 min. We produced transgenic plants in a phyA-201 null background that express the PHYA-yellow fluorescent protein (YFP) or the PHYA686-YFP-dimerization domain (DD) and PHYA686-YFP-DD-nuclear localization signal (NLS) or PHYA686-YFP-DD-nuclear exclusion signal (NES) fusion proteins. The PHYA686-YFP fusion proteins contained the N-terminal domain of phyA (686 amino acid residues), a short DD and the YFP. Here we report that (i) PHYA686-YFP-DD fusion protein is imported into the nucleus in a light-dependent fashion; (ii) neither of the PHYA686 fusion proteins is functional in FR-HIR and nuclear VLFR; and (iii) the phyA-dependent, blue light-induced inhibition of hypocotyl growth is mediated by the PHYA686-YFP-DD-NES but not by the PHYA686-YFP-DD-NLS and PHYA686-YFP-DD fusion proteins. We demonstrate that (i) light induces degradation of all PHYA N-terminal-containing fusion proteins and (ii) these N-terminal domain-containing fusion proteins including the constitutively nuclear PHYA686-YFP-DD-NLS and predominantly cytoplasmic PHYA686-YFP-DD-NES degrade at comparable rates but markedly more slowly than PHYA-YFP, whereas (iii) light-induced degradation of the native phyA is faster compared with PHYA-YFP.

Indexed as

LightActive Transport, Cell NucleusArabidopsisArabidopsis ProteinsBacterial ProteinsCell NucleusCloning, MolecularLuminescent ProteinsPhytochrome APlants, Genetically ModifiedRecombinant Fusion ProteinsRNA, PlantSignal TransductionArabidopsis ProteinsBacterial ProteinsLuminescent ProteinsPHYA protein, ArabidopsisPhytochrome ARecombinant Fusion ProteinsRNA, Plantyellow fluorescent protein, Bacteria

Identifiers

PMID21169346
PMCPMC3037077
OpenAlexW2065202791

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.