ArticleBMC genomics2010
Comparison of transcriptomic landscapes of bovine embryos using RNA-Seq.
Article in BMC genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
38 citing papers in PubMed, 101 citations in OpenAlex.
- Article
- Elucidation of the pluripotent potential of bovine embryonic lineages facilitates the establishment of formative stem cell lines.Cellular and molecular life sciences : CMLS · 2024Article
- Pre-Implantation Bovine Embryo Evaluation-From Optics to Omics and Beyond.Animals : an open access journal from MDPI · 2023Review
- The Use of a Brief Synchronization Treatment after Weaning, Combined with Superovulation, Has Moderate Effects on the Gene Expression of Surviving Pig Blastocysts.Animals : an open access journal from MDPI · 2023Article
- Identification of Genetic Effects ofGenes · 2022Article
- Gene Expression in Embryos From Norwegian Red Bulls With High or Low Non Return Rate: An RNA-Seq Study of in vivo-Produced Single Embryos.Frontiers in genetics · 2021Article
- Identification of candidate genes for milk production traits by RNA sequencing on bovine liver at different lactation stages.BMC genetics · 2020Article
- Longissimus Dorsi Muscle Transcriptomic Analysis of Simmental and Chinese Native Cattle Differing in Meat Quality.Frontiers in veterinary science · 2020Article
- RNA-Seq Analysis Identifies Differentially Expressed Genes Insubcutaneous Adipose Tissuein Qaidamford Cattle, Cattle-Yak, and Angus Cattle.Animals : an open access journal from MDPI · 2019Article
- Comparative analysis of differentially expressed genes between the ovaries from pregnant and nonpregnant goats using RNA-Seq.Journal of biological research (Thessalonike, Greece) · 2019Article
- Contributions of RNA-seq to improveAnimal reproduction · 2019Review
- Global transcriptome analysis of different stages of preimplantation embryo development in river buffalo.PeerJ · 2019Article
- Identification of single nucleotide polymorphisms ofJournal of animal science and biotechnology · 2019Article
- Article
- Pheromone expression reveals putative mechanism of unisexuality in a saprobic ascomycete fungus.PloS one · 2018Article
- Using RNA sequencing to identify putative competing endogenous RNAs (ceRNAs) potentially regulating fat metabolism in bovine liver.Scientific reports · 2017Article
- High-resolution profiles of gene expression and DNA methylation highlight mitochondrial modifications during early embryonic development.The Journal of reproduction and development · 2017Article
- Article
- RNA-Seq reveals 10 novel promising candidate genes affecting milk protein concentration in the Chinese Holstein population.Scientific reports · 2016Article
- iTRAQ-based quantitative proteomic analysis reveals the distinct early embryo myofiber type characteristics involved in landrace and miniature pig.BMC genomics · 2016Article
Corrections and comments
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundAdvances in sequencing technologies have opened a new era of high throughput investigations. Although RNA-seq has been demonstrated in many organisms, no study has provided a comprehensive investigation of the bovine transcriptome using RNA-seq.
resultsIn this study, we provide a deep survey of the bovine embryonic transcriptomes, the first application of RNA-seq in cattle. Embryos cultured in vitro were used as models to study early embryonic development in cattle. RNA amplified from limited amounts of starting total RNA were sequenced and mapped to the reference genome to obtain digital gene expression at single base resolution. In particular, gene expression estimates from more than 1.6 million unannotated bases in 1785 novel transcribed units were obtained. We compared the transcriptomes of embryos showing distinct developmental statuses and found genes that showed differential overall expression as well as alternative splicing.
conclusionOur study demonstrates the power of RNA-seq and provides further understanding of bovine preimplantation embryonic development at a fine scale.
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